@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu19540: (2016-07-01 )
MGNTMCPKMESAFSLLGKRWNGLIIHVLMDGPKRFKEITETIPMISQKMLAERLKELEQNEIVERQVLPETPVKVIYTLTEKGTALQAVFQEMQAWADQFCEPGDTVCEEEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




BME_C_7(4A5N)
YYBR_BACSU
[Raw transfer]




BME_B_6(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_E_15(4A5M)
YYBR_BACSU
[Raw transfer]




BME_D_8(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_A_12(4A5M)
YYBR_BACSU
[Raw transfer]




EDO_E_14(4A5M)
YYBR_BACSU
[Raw transfer]




4 PsiBlast_PDB 85.6137%-180 - C1 -4A5N 1.9 YYBR_BACSU
43 HHSearch 84.2134%-179 - C1 -4A5N 1.9 YYBR_BACSU
27 PsiBlast_CBE 82.3437%-185 - C1 -4A5N 2.7 YYBR_BACSU
26 PsiBlast_CBE 81.4638%-178 - C1 -4A5M - YYBR_BACSU -
24 PsiBlast_CBE 80.7438%-173 - C1 -4A5M - YYBR_BACSU -
29 PsiBlast_CBE 80.3937%-181 - C1 -4A5N 2.7 YYBR_BACSU
3 PsiBlast_PDB 80.3638%-171 - C1 -4A5M 2.2 YYBR_BACSU
25 PsiBlast_CBE 80.2938%-172 - C1 -4A5M 3.0 YYBR_BACSU
28 PsiBlast_CBE 80.2137%-183 - C1 -4A5N 2.8 YYBR_BACSU
23 PsiBlast_CBE 78.3038%-156 - C1 -4A5M - YYBR_BACSU -
22 PsiBlast_CBE 77.6138% -28 - C1 -4HQE - ? -
30 Fugue 77.4538% -31 - C1 -4HQE - ? -
2 PsiBlast_PDB 76.1838% -32 - C1 -4HQE - ? -
1 PsiBlast_PDB 73.8638% -23 - C1 -4HQM - ? -
46 HHSearch 73.7630%-151 - C1 -1Z7U - ? -
44 HHSearch 73.6632%-154 - C1 -2HZT - YTCD_BACSU -
41 HHSearch 72.4938% 29 - C1 -4HQE - ? -
5 PsiBlast_PDB 72.4733%-156 - C1 -2HZT - YTCD_BACSU -
6 PsiBlast_PDB 72.3731%-152 - C1 -1Z7U - ? -
9 PsiBlast_PDB 72.2328%-159 - C1 -2F2E - ? -