@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34450: (2016-07-28 )
MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISHITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDEIERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSVVKDSILEQGQLTVNK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_2(1PT2)
SACB_BACSU
[Raw transfer]



RAF_A_2(3BYN)
SACB_BACSU
[Raw transfer]



DQR_A_2(2YFT)
INUS_LACJO
[Raw transfer]



SUC_A_2(2YFS)
INUS_LACJO
[Raw transfer]



GOL_A_24(2YFR)
INUS_LACJO
[Raw transfer]



GOL_A_24(2YFR)
INUS_LACJO
[Raw transfer]



GOL_A_16(2YFR)
INUS_LACJO
[Raw transfer]



EDO_A_6(1OYG)
SACB_BACSU
[Raw transfer]



EDO_A_6(1OYG)
SACB_BACSU
[Raw transfer]



EDO_A_6(1OYG)
SACB_BACSU
[Raw transfer]



SUC_A_3(2YFS)
INUS_LACJO
[Raw transfer]
33 Fugue 93.40100% -44 - C4 -1OYG 2.6 SACB_BACSU
5 PsiBlast_PDB 93.2099% -44 - C4 -1OYG 2.6 SACB_BACSU
6 PsiBlast_PDB 93.0399% -47 - C4 -1PT2 4.5 SACB_BACSU
4 PsiBlast_PDB 93.0399% -45 - C4 -3BYK - SACB_BACSU -
2 PsiBlast_PDB 92.8599% -46 - C4 -3BYN 4.5 SACB_BACSU
1 PsiBlast_PDB 92.8599% -43 - C4 -3BYL - SACB_BACSU -
3 PsiBlast_PDB 92.6899% -45 - C4 -3BYJ - SACB_BACSU -
7 PsiBlast_PDB 89.4099% -44 - C4 -2VDT - SACB_BACSU -
43 HHSearch 76.9299% 57 - C4 -1OYG 2.6 SACB_BACSU
26 PsiBlast_CBE 73.8774% 66 - C4 -3OM4 - ? -
24 PsiBlast_CBE 73.5674% 65 - C4 -3OM4 - ? -
28 PsiBlast_CBE 73.3974% 67 - C4 -3OM5 - ? -
21 PsiBlast_CBE 73.3774% 69 - C4 -3OM7 - ? -
10 PsiBlast_PDB 73.3374% 68 - C4 -3OM5 - ? -
8 PsiBlast_PDB 73.3074% 69 - C4 -3OM7 - ? -
22 PsiBlast_CBE 73.2874% 67 - C4 -3OM7 - ? -
23 PsiBlast_CBE 73.1574% 68 - C4 -3OM7 - ? -
29 PsiBlast_CBE 73.1174% 68 - C4 -3OM5 - ? -
30 PsiBlast_CBE 73.1074% 68 - C4 -3OM6 - ? -
25 PsiBlast_CBE 73.0974% 67 - C4 -3OM4 - ? -
46 HHSearch 55.8638% 33 - C4 -2YFR 2.7 INUS_LACJO
14 PsiBlast_PDB 53.8837% 38 - C4 -2YFT 4.5 INUS_LACJO
13 PsiBlast_PDB 53.8837% 38 - C4 -2YFR 2.9 INUS_LACJO
15 PsiBlast_PDB 53.6537% 37 - C4 -2YFS 4.7 INUS_LACJO