@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu38860: (2016-08-04 )
MAILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGKDLTFYEADLLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWSVALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYIHVVDLAEGHVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFADPAKAKRELGWEAKRGLEEMCADSWRWQSSNVNGYKSAE

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_A_3(1KVT)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRJ)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1A9Z)
GALE_ECOLI
[Raw transfer]




NAD_A_7(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_4(1KVS)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRL)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1XEL)
GALE_ECOLI
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDA)
GALE_ECOLI
[Raw transfer]




NAD_C_16(4LIS)
?
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_A_5(4LIS)
?
[Raw transfer]




NAD_C_3(1EK5)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1KVU)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1UDC)
GALE_ECOLI
[Raw transfer]




NAD_A_6(1KVR)
GALE_ECOLI
[Raw transfer]




NAD_A_5(4LIS)
?
[Raw transfer]




NAD_A_4(1KVQ)
GALE_ECOLI
[Raw transfer]




NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




GUD_B_6(3ENK)
?
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_B_11(4LIS)
?
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_B_9(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_9(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_B_6(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRK)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1NAI)
GALE_ECOLI
[Raw transfer]




NAD_A_4(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1NAH)
GALE_ECOLI
[Raw transfer]




NAD_A_3(4ZRN)
?
[Raw transfer]




NAD_A_2(2P5Y)
?
[Raw transfer]




GUD_A_4(3ENK)
?
[Raw transfer]




GDU_B_4(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_B_5(4ZRN)
?
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




GDU_A_3(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




NAD_A_2(4TWR)
?
[Raw transfer]




NAD_A_3(4ZRM)
?
[Raw transfer]




NAD_B_6(4ZRM)
?
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




EDO_A_8(1UDA)
GALE_ECOLI
[Raw transfer]




72 HHSearch 99.1465% -98 - C1 -3ENK 13.0 ?
1 PsiBlast_PDB 98.2465% -98 - C1 -3ENK 13.0 ?
21 PsiBlast_CBE 96.5165% -96 - C1 -3ENK 12.9 ?
30 PsiBlast_CBE 86.2057% -45 - C1 -1KVQ 12.3 GALE_ECOLI
33 PsiBlast_CBE 85.7456% -42 - C1 -1A9Z 12.3 GALE_ECOLI
28 PsiBlast_CBE 85.0357% -43 - C1 -2UDP 12.6 GALE_ECOLI
16 PsiBlast_PDB 85.0057% -41 - C1 -1UDA 13.0 GALE_ECOLI
74 HHSearch 84.8357% -43 - C1 -1UDB 13.0 GALE_ECOLI
29 PsiBlast_CBE 84.7757% -45 - C1 -1KVS 11.8 GALE_ECOLI
9 PsiBlast_PDB 84.7357% -47 - C1 -1LRK 13.2 GALE_ECOLI
17 PsiBlast_PDB 84.7157% -43 - C1 -1UDB 13.0 GALE_ECOLI
14 PsiBlast_PDB 84.6457% -44 - C1 -1NAH 12.8 GALE_ECOLI
18 PsiBlast_PDB 84.6257% -44 - C1 -1XEL 12.8 GALE_ECOLI
15 PsiBlast_PDB 84.4557% -45 - C1 -1NAI 12.8 GALE_ECOLI
11 PsiBlast_PDB 84.2557% -43 - C1 -2UDP 13.2 GALE_ECOLI
10 PsiBlast_PDB 84.2557% -44 - C1 -1LRL 12.5 GALE_ECOLI
31 PsiBlast_CBE 84.1656% -45 - C1 -1A9Y 12.3 GALE_ECOLI
12 PsiBlast_PDB 84.1057% -41 - C1 -1UDC 12.8 GALE_ECOLI
13 PsiBlast_PDB 84.0257% -43 - C1 -1LRJ 12.0 GALE_ECOLI
20 PsiBlast_PDB 83.9957% -42 - C1 -1KVR 12.5 GALE_ECOLI
34 PsiBlast_CBE 83.9155% -50 - C1 -1Z45 13.1 GAL10_YEAST
19 PsiBlast_PDB 83.6757% -41 - C1 -1KVU 12.4 GALE_ECOLI
32 PsiBlast_CBE 83.3957% -44 - C1 -1KVT 12.1 GALE_ECOLI
81 HHSearch 80.0654% -26 - C1 -4LIS 11.9 ?
25 PsiBlast_CBE 78.6960% 15 - C1 -1I3L 12.6 GALE_HUMAN
26 PsiBlast_CBE 78.1560% 14 - C1 -1I3K 12.6 GALE_HUMAN
2 PsiBlast_PDB 78.1560% 12 - C1 -1HZJ 12.9 GALE_HUMAN
37 PsiBlast_CBE 77.8352% -25 - C1 -4LIS 11.9 ?
23 PsiBlast_CBE 77.7160% 12 - C1 -1I3N 12.3 GALE_HUMAN
70 HHSearch 77.3461% 13 - C1 -1EK6 12.7 GALE_HUMAN
4 PsiBlast_PDB 77.2360% 12 - C1 -1I3L 12.4 GALE_HUMAN
6 PsiBlast_PDB 77.1760% 12 - C1 -1I3N 12.5 GALE_HUMAN
3 PsiBlast_PDB 77.1560% 11 - C1 -1I3K 12.3 GALE_HUMAN
24 PsiBlast_CBE 77.0960% 15 - C1 -1I3M 12.1 GALE_HUMAN
35 PsiBlast_CBE 76.5452% -22 - C1 -4LIS 12.3 ?
36 PsiBlast_CBE 76.4852% -24 - C1 -4LIS 12.0 ?
5 PsiBlast_PDB 76.3560% 12 - C1 -1I3M 12.4 GALE_HUMAN
8 PsiBlast_PDB 76.2260% 13 - C1 -1EK6 12.7 GALE_HUMAN
7 PsiBlast_PDB 76.1260% 14 - C1 -1EK5 11.7 GALE_HUMAN
22 PsiBlast_CBE 75.0860% 12 - C1 -1HZJ 11.2 GALE_HUMAN
27 PsiBlast_CBE 74.8260% 13 - C1 -1EK6 12.6 GALE_HUMAN
69 HHSearch 74.0741% -85 - C1 -4WOK 8.0 ?
45 PsiBlast_CBE 66.2543% -54 - C1 -4TWR 7.1 ?
44 PsiBlast_CBE 64.7943% -54 - C1 -4WOK 7.9 ?
56 PsiBlast_CBE 57.2133% -41 * C1 *2P5Y 6.3 ?
53 PsiBlast_CBE 55.4133% -44 - C1 -4ZRN 9.8 ?
52 PsiBlast_CBE 55.1633% -43 - C1 -4ZRN 10.1 ?
54 PsiBlast_CBE 53.9433% -45 - C1 -4ZRM 7.4 ?
55 PsiBlast_CBE 52.6433% -42 - C1 -4ZRM 8.0 ?