@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0391: (2016-04-22 )
MTDESSVRTPKALPDGVSQATVGVRGGMLRSGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



PLP_B_5(5DX5)
?
[Raw transfer]



PLP_A_3(5DX5)
?
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_A_3(5DX5)
?
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
21 PsiBlast_CBE 74.3837% -97 - C1 -5DX5 4.5 ?
6 PsiBlast_PDB 74.3840%-103 - C1 -3JWA 4.4 ?
9 PsiBlast_PDB 74.3440%-107 - C1 -2RFV - ? -
3 PsiBlast_PDB 73.6440%-102 - C1 -4HF8 5.0 ?
5 PsiBlast_PDB 73.6340%-104 - C1 -3JW9 3.5 ?
2 PsiBlast_PDB 73.5140%-103 - C1 -4OMA 4.7 ?
107 HHSearch 73.4737% -96 - C1 -5DX5 3.1 ?
108 HHSearch 73.2135% -93 - C1 -1E5E 4.5 ?
40 PsiBlast_CBE 72.8934% -94 - C1 -1E5F 3.5 ?
4 PsiBlast_PDB 72.7340%-105 - C1 -3MKJ 4.8 ?
11 PsiBlast_PDB 72.4437% -97 - C1 -5DX5 3.0 ?
7 PsiBlast_PDB 72.1940%-102 - C1 -3JWB 2.9 ?
18 PsiBlast_PDB 72.0034% -92 - C1 -1E5E 4.3 ?
44 PsiBlast_CBE 71.8439%-102 - C1 -4IY7 - ? -
32 PsiBlast_CBE 71.7838%-100 - C1 -3VK2 - MEGL_PSEPU -
43 PsiBlast_CBE 71.7539%-101 - C1 -4IY7 - ? -
45 PsiBlast_CBE 71.5839%-101 - C1 -4IY7 - ? -
42 PsiBlast_CBE 71.3839%-100 - C1 -4IYO - ? -
41 PsiBlast_CBE 71.3234% -93 - C1 -1E5E 3.7 ?
19 PsiBlast_PDB 71.1834% -92 - C1 -1E5F 3.9 ?
111 HHSearch 67.6534% -93 - C1 -2CTZ 4.9 ?