@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0886: (2016-04-26 )
MPHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGSGPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDRIAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPDFNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTAGADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQRRAGGVQFSVTGTDELRQLDAGLVLTSIGYRGKPIPDLPFDEQAALVPNDGGRVIDPGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALVADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSAPKEPLRRRVLARLRDLGQPIVLTVPL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(1E1L)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(1E1N)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(2C7G)
FPRA_MYCTU
[Raw transfer]



FAD_C_10(1E6E)
ADRO_BOVIN
[Raw transfer]



FAD_A_5(1E6E)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(1E1K)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(1E1M)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(1CJC)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(1CJC)
ADRO_BOVIN
[Raw transfer]



FAD_A_2(1CJC)
ADRO_BOVIN
[Raw transfer]
102 HHSearch 93.3844% -96 - C5 -1LQT - FPRA_MYCTU -
1 PsiBlast_PDB 90.7841% -96 - C5 -1LQT - FPRA_MYCTU -
2 PsiBlast_PDB 90.3041% -95 - C5 -1LQU - FPRA_MYCTU -
21 PsiBlast_CBE 89.7841% -94 - C5 -1LQU - FPRA_MYCTU -
22 PsiBlast_CBE 89.6141% -92 - C5 -1LQT - FPRA_MYCTU -
103 HHSearch 89.2640% -98 * C5 *1CJC 13.8 ADRO_BOVIN
6 PsiBlast_PDB 88.5939% -96 - C5 -1E1K 12.3 ADRO_BOVIN
4 PsiBlast_PDB 88.5739% -98 - C5 -1CJC 13.8 ADRO_BOVIN
23 PsiBlast_CBE 88.4939% -96 - C5 -1E6E 11.8 ADRO_BOVIN
7 PsiBlast_PDB 88.4839% -95 - C5 -1E1M 12.5 ADRO_BOVIN
5 PsiBlast_PDB 88.4339%-102 - C5 -1E1L 13.2 ADRO_BOVIN
9 PsiBlast_PDB 88.3539% -96 - C5 -1E6E 11.6 ADRO_BOVIN
3 PsiBlast_PDB 88.2840% -98 - C5 -2C7G 13.6 FPRA_MYCTU
8 PsiBlast_PDB 87.8339% -97 - C5 -1E1N 12.5 ADRO_BOVIN
105 HHSearch 61.5722% -79 - C5 -4YLF - ? -
124 Fugue 56.6339%-104 - C5 -1CJC 2.5 ADRO_BOVIN
104 HHSearch 52.6622% -67 - C5 -2VDC - GLTD_AZOBR -
130 Fugue 52.5016% -60 - C5 -1GTE - DPYD_PIG -
120 HHSearch 51.6718% -83 - C5 -3F8D - ? -
106 HHSearch 50.2919% -76 - C5 -1GTE - DPYD_PIG -