@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0952: (2016-04-27 )
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_U_21(1JKJ)
SUCD_ECOLI
[Raw transfer]




COA_A_11(2NU8)
SUCD_ECOLI
[Raw transfer]




COA_A_11(2NU8)
SUCD_ECOLI
[Raw transfer]




COA_D_10(1CQJ)
SUCD_ECOLI
[Raw transfer]




COA_A_9(1CQJ)
SUCD_ECOLI
[Raw transfer]




COA_A_12(2NUA)
SUCD_ECOLI
[Raw transfer]




COA_A_11(2NU7)
SUCD_ECOLI
[Raw transfer]




COA_W_23(1JLL)
SUCD_ECOLI
[Raw transfer]




COA_D_10(1CQI)
SUCD_ECOLI
[Raw transfer]




COA_U_21(1JLL)
SUCD_ECOLI
[Raw transfer]




COA_A_3(4XX0)
SUCA_PIG
[Raw transfer]




COA_G_7(2SCU)
SUCD_ECOLI
[Raw transfer]




29 HHSearch 96.3450%-107 - C3 -2NU8 9.2 SUCD_ECOLI
5 PsiBlast_PDB 94.6954%-106 - C3 -2NUA 6.2 SUCD_ECOLI
26 PsiBlast_CBE 94.1854%-105 - C3 -2NUA - SUCD_ECOLI -
21 PsiBlast_CBE 93.9054%-101 - C3 -1CQJ 8.2 SUCD_ECOLI
23 PsiBlast_CBE 93.8554%-101 - C3 -1SCU - SUCD_ECOLI -
6 PsiBlast_PDB 93.7053%-102 - C3 -2NU7 8.3 SUCD_ECOLI
7 PsiBlast_PDB 93.6753%-103 - C3 -2NU8 9.2 SUCD_ECOLI
25 PsiBlast_CBE 93.6054% -99 - C3 -1JKJ - SUCD_ECOLI -
9 PsiBlast_PDB 93.5450%-119 - C3 -2YV1 - SUCD_METJA -
2 PsiBlast_PDB 93.5354%-101 - C3 -1CQJ 8.0 SUCD_ECOLI
24 PsiBlast_CBE 93.2754% -99 - C3 -1JLL 6.1 SUCD_ECOLI
4 PsiBlast_PDB 93.2154% -98 - C3 -1JLL 7.0 SUCD_ECOLI
27 PsiBlast_CBE 93.0453%-102 - C3 -2NU7 - SUCD_ECOLI -
3 PsiBlast_PDB 92.9554% -99 - C3 -1JKJ 9.1 SUCD_ECOLI
28 PsiBlast_CBE 92.8653%-102 - C3 -2NU8 - SUCD_ECOLI -
22 PsiBlast_CBE 92.2854%-102 - C3 -1CQI 6.9 SUCD_ECOLI
14 PsiBlast_PDB 92.2445%-110 - C3 -3UFX - SUCD_THETH -
1 PsiBlast_PDB 91.7854%-101 - C3 -1CQI - SUCD_ECOLI -
13 PsiBlast_PDB 91.3545%-115 - C3 -1OI7 - SUCD_THETH -
33 HHSearch 91.3349%-116 - C3 -2YV1 - SUCD_METJA -
12 PsiBlast_PDB 88.4848% -98 - C3 -4XX0 7.8 SUCA_PIG
53 Fugue 57.4750%-114 * C3 *2SCU 7.8 SUCD_ECOLI