@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1454c: (2016-05-01 )
MHAIEVTETGGPGVLRHVDQPQPQPGHGELLIKAEAIGVNFIDTYFRSGQYPRELPFVIGSEVCGTVEAVGPGVTAADTAISVGDRVVSASANGAYAEFCTAPASLTAKVPDDVTSEVAASALLKGLTAHYLLKSVYPVKRGDTVLVHAGAGGVGLILTQWATHLGVRVITTVSTAEKAKLSKDAGADVVLDYPEDAWQFAGRVRELTGGTGVQAVYDGVGATTFDASLASLAVRGTLALFGAASGPVPPVDPQRLNAAGSVYLTRPSLFHFTRTGEEFSWRAAELFDAIGSEAITVAVGGRYPLADALRAHQDLEARKTVGSVVLLP

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_D_8(4RVU)
?
[Raw transfer]



NDP_C_7(4RVU)
?
[Raw transfer]



NDP_A_2(3JYN)
?
[Raw transfer]



NDP_A_5(4RVU)
?
[Raw transfer]



NAP_A_5(1QOR)
QOR1_ECOLI
[Raw transfer]



NAP_B_6(1QOR)
QOR1_ECOLI
[Raw transfer]



GOL_B_20(2WEK)
ZADH2_HUMAN
[Raw transfer]



GOL_A_10(2WEK)
ZADH2_HUMAN
[Raw transfer]
1 PsiBlast_PDB 98.0999%-119 - C1 -4RVS - ? -
2 PsiBlast_PDB 97.8499%-112 - C1 -4RVU - ? -
21 PsiBlast_CBE 97.7799%-117 - C1 -4RVU 11.7 ?
22 PsiBlast_CBE 97.6199%-116 - C1 -4RVU 12.1 ?
66 HHSearch 97.4999%-112 - C1 -4RVU 12.2 ?
3 PsiBlast_PDB 77.3745%-110 - C1 -1QOR - QOR1_ECOLI -
23 PsiBlast_CBE 76.3045%-110 - C1 -1QOR 12.1 QOR1_ECOLI
68 HHSearch 76.1546%-111 * C1 *1QOR 11.4 QOR1_ECOLI
4 PsiBlast_PDB 75.2044%-108 - C1 -3JYL - ? -
5 PsiBlast_PDB 74.5744%-107 - C1 -3JYN - ? -
69 HHSearch 73.7845%-105 - C1 -3JYN 11.6 ?
85 HHSearch 72.0439%-102 - C1 -3QWB - QOR_YEAST -
7 PsiBlast_PDB 71.8839%-101 - C1 -3QWA - QOR_YEAST -
6 PsiBlast_PDB 70.8840%-113 - C1 -1WLY - CAA43_BURSP -
25 PsiBlast_CBE 70.2939% -99 - C1 -3QWB - QOR_YEAST -
26 PsiBlast_CBE 70.2839% -97 - C1 -3QWB - QOR_YEAST -
24 PsiBlast_CBE 69.8839% -97 - C1 -3QWB - QOR_YEAST -
8 PsiBlast_PDB 69.6139% -95 - C1 -3QWB - QOR_YEAST -
28 PsiBlast_CBE 65.7931%-100 - C1 -1YB5 - QOR_HUMAN -
75 HHSearch 65.1033%-103 - C1 -2EIH - ? -
30 PsiBlast_CBE 43.8035% -91 - C1 -2WEK 2.9 ZADH2_HUMAN
17 PsiBlast_PDB 43.6435% -92 - C1 -2WEK 2.8 ZADH2_HUMAN