@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2947c: (2016-05-15 )
MIEEQRTMSVEGADQQSEKLFHYLKKVAVELDETRARLREYEQRATEPVAVVGIGCRFPGGVDGPDGLWDVVSAGRDVVSEFPTDRGWDVEGLYDPDPDAEGKTYTRWGAFLDDATGFDAGFFGIAPSEVLAMDPQQRLMLEVSWEALEHAGIDPLSLRGSATGVYTGIFAASYGNRDTGGLQGYGLTGTSISVASGRVSYVLGLQGPAVSVDTACSSSLVAIHWAMSSLRSGECDLALAGGVTVMGLPSIFVGFSRQRGLAADGRCKAFAAAADGTGWGEGAGVVVLERLSDARRLGHSVLAVVRGSAVNQDGASNGLTAPNGLAQQRVIQVALANAGLSAADVDVVEAHGTATTLGDPIEAQALLSTYGQGGPAEQPLWVGSIKSNMGHTQAAAGVAGVIKMVQAMRHGVMPATLHVDEPSPRVDWTSGAVSVLTEAREWSVDGRPRRAAVSSFGISGTNAHLILEEAPVPAPAEAPVEASESTGGRGRRWCRG

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

840_A_2(3I8P)
FABF_ECOLI
[Raw transfer]



PMN_A_2(3HNZ)
FABF_ECOLI
[Raw transfer]



P9C_A_2(3G11)
FABF_ECOLI
[Raw transfer]



PMN_C_3(2GFX)
FABF_ECOLI
[Raw transfer]



N3A_A_2(3HO9)
FABF_ECOLI
[Raw transfer]



P9A_A_2(3G0Y)
FABF_ECOLI
[Raw transfer]



N32_A_2(3HO2)
FABF_ECOLI
[Raw transfer]



GOL_A_4(4OQJ)
?
[Raw transfer]



GOL_A_4(4OQJ)
?
[Raw transfer]



6NA_A_3(2IX4)
KASM_ARATH
[Raw transfer]



6NA_B_5(2IX4)
KASM_ARATH
[Raw transfer]
74 Fugue 96.4159% -84 - C3 -2QO3 - ERYA2_SACER -
1 PsiBlast_PDB 90.3663% -91 - C3 -2HG4 - ERYA3_SACER -
3 PsiBlast_PDB 90.2250% -86 - C3 -4MZ0 - ? -
21 PsiBlast_CBE 90.1761% -91 - C3 -2QO3 - ERYA2_SACER -
2 PsiBlast_PDB 90.1761% -88 - C3 -2QO3 - ERYA2_SACER -
88 HHSearch 90.0661% -87 - C3 -2QO3 - ERYA2_SACER -
22 PsiBlast_CBE 89.7850% -86 - C3 -4MZ0 - ? -
95 HHSearch 89.4567% -90 - C3 -2HG4 - ERYA3_SACER -
94 HHSearch 88.3352% -85 - C3 -4MZ0 - ? -
77 Fugue 85.1933% -82 - C3 -4KC5 - ? -
90 HHSearch 84.5741% -83 - C3 -4NA1 - PKSJ_BACSU -
9 PsiBlast_PDB 81.5541% -86 - C3 -4QYR - ? -
14 PsiBlast_PDB 81.2733% -83 * C3 *4KC5 - ? -
98 HHSearch 81.2042% -79 - C3 -4OQJ 3.5 ?
6 PsiBlast_PDB 81.1039% -85 - C3 -4OPE - ? -
99 HHSearch 81.0833% -79 - C3 -4KC5 - ? -
87 HHSearch 80.9339% -83 - C3 -4OPE - ? -
5 PsiBlast_PDB 80.8940% -92 - C3 -5ERF - PKSL_BACSU -
7 PsiBlast_PDB 80.8543% -86 - C3 -4OQJ 3.5 ?
4 PsiBlast_PDB 80.6340% -88 - C3 -5ERB - ? -
27 PsiBlast_CBE 55.6933% -69 - C3 -2IX4 3.5 KASM_ARATH
46 PsiBlast_CBE 55.2431% -63 - C3 -3G11 6.5 FABF_ECOLI
18 PsiBlast_PDB 55.2233% -68 - C3 -2IX4 3.4 KASM_ARATH
45 PsiBlast_CBE 55.0531% -60 - C3 -3HNZ 6.0 FABF_ECOLI
44 PsiBlast_CBE 54.9631% -60 - C3 -3HO2 5.7 FABF_ECOLI
43 PsiBlast_CBE 54.8531% -61 - C3 -3HO9 5.6 FABF_ECOLI
47 PsiBlast_CBE 54.8331% -60 - C3 -3G0Y 5.9 FABF_ECOLI
42 PsiBlast_CBE 54.7631% -60 - C3 -3I8P 5.4 FABF_ECOLI
48 PsiBlast_CBE 54.3131% -62 - C3 -2GFX 6.0 FABF_ECOLI