@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2986c: (2016-05-15 )
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPAKKATKAAKKAATKAPARKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKASVRKAATKAPAKKAAAKRPATKAPAKKATARRGRK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_4(1P51)
DBH_NOSS1
[Raw transfer]
-
FMT_B_6(4PT4)
DBH_MYCTO
[Raw transfer]



NACID_H_4(1P51)
DBH_NOSS1
[Raw transfer]
-
NACID_E_1(1P51)
DBH_NOSS1
[Raw transfer]
-
NACID_D_2(1P78)
DBH_NOSS1
[Raw transfer]
-
NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]
-
NACID_F_2(1P51)
DBH_NOSS1
[Raw transfer]
-
NACID_E_3(2IIE)

[Raw transfer]
-
NACID_C_1(1P78)
DBH_NOSS1
[Raw transfer]
-
NACID_C_3(4QJU)
DBH_STAAM
[Raw transfer]
-
NACID_D_4(4QJU)
DBH_STAAM
[Raw transfer]
-
NACID_C_1(1P71)
DBH_NOSS1
[Raw transfer]
-
NACID_D_4(4QJU)
DBH_STAAM
[Raw transfer]
-
NACID_C_1(1P71)
DBH_NOSS1
[Raw transfer]
-
NACID_I_3(1P51)
DBH_NOSS1
[Raw transfer]
-
NACID_D_2(1OWF)
IHFB_ECOLI
[Raw transfer]
-
2 PsiBlast_PDB 87.86100% -65 - C8 -4PT4 - DBH_MYCTO (first) -
1 PsiBlast_PDB 87.35100% -66 - C8 -4DKY - DBH_MYCTU -
34 HHSearch 87.01100% -65 - C8 -4PT4 - DBH_MYCTO (first) -
21 PsiBlast_CBE 86.06100% -66 - C8 -4PT4 2.7 DBH_MYCTO (first)
9 PsiBlast_PDB 68.5237% -45 - C8 -2IIF - IHFA_ECOLI (first) -
42 HHSearch 67.0339% -38 - C8 -1OWF - IHFA_ECOLI -
15 PsiBlast_PDB 66.7339% -38 - C8 -1OWF - IHFA_ECOLI -
10 PsiBlast_PDB 66.4637% -38 - C8 -2IIE - IHFA_ECOLI (first) -
12 PsiBlast_PDB 65.7839% -58 - C8 -4QJU 6.0 DBH_STAAM
11 PsiBlast_PDB 65.5139% -55 - C8 -4QJN - DBH_STAAM -
38 HHSearch 65.4338% -56 - C8 -4QJU 6.0 DBH_STAAM
26 PsiBlast_CBE 65.0945% -49 - C8 -1P51 4.2 DBH_NOSS1
14 PsiBlast_PDB 64.6439% -35 - C8 -1OUZ - IHFA_ECOLI -
16 PsiBlast_PDB 64.5739% -34 - C8 -1OWG - IHFA_ECOLI -
45 HHSearch 64.4439% -35 - C8 -2IIE - IHFA_ECOLI (first) -
17 PsiBlast_PDB 64.4039% -40 - C8 -2HT0 - IHFA_ECOLI -
27 PsiBlast_CBE 63.9939% -52 - C8 -4QJU 5.9 DBH_STAAM
25 PsiBlast_CBE 63.8045% -49 - C8 -1P51 4.5 DBH_NOSS1
24 PsiBlast_CBE 63.6445% -42 - C8 -1P51 3.6 DBH_NOSS1
3 PsiBlast_PDB 63.5248% -41 - C8 -1HUE - DBH_GEOSE -
23 PsiBlast_CBE 63.3745% -48 - C8 -1P71 1128214396763122245304320.0 DBH_NOSS1
5 PsiBlast_PDB 63.0545% -48 - C8 -1P51 2.9 DBH_NOSS1
7 PsiBlast_PDB 62.3245% -49 - C8 -1P78 5.2 DBH_NOSS1
39 HHSearch 61.7930% -43 - C8 -1OWF 2.4 IHFB_ECOLI
6 PsiBlast_PDB 60.7945% -31 - C8 -1P71 5.1 DBH_NOSS1
36 HHSearch 60.4343% -30 - C8 -1P71 5.1 DBH_NOSS1
22 PsiBlast_CBE 60.1245% -47 - C8 -1P78 4.7 DBH_NOSS1
47 HHSearch 33.3231% 9 - C8 -2IIE 3.0