@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3102c: (2016-05-16 )
MITLDHVTKQYKSSARPALDDINVKIDKGEFVFLIGPSGSGKSTFMRLLLAAETPTSGDVRVSKFHVNKLRGRHVPKLRQVIGCVFQDFRLLQQKTVYDNVAFALEVIGKRTDAINRVVPEVLETVGLSGKANRLPDELSGGEQQRVAIARAFVNRPLVLLADEPTGNLDPETSRDIMDLLERINRTGTTVLMATHDHHIVDSMRQRVVELSLGRLVRDEQRGVYGMDR

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]
108 HHSearch 95.6440%-113 - C1 -3TUI - METN_ECOLI -
2 PsiBlast_PDB 94.9240%-119 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 94.4940%-124 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 94.0740%-121 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 93.2440%-120 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 93.0740%-119 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 92.3940%-117 - C1 -3TUI - METN_ECOLI -
27 PsiBlast_CBE 92.0240%-124 - C1 -1L2T - Y796_METJA -
28 PsiBlast_CBE 91.9339%-127 - C1 -3TIF - Y796_METJA -
22 PsiBlast_CBE 91.9140%-115 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 91.8540%-120 - C1 -3TUZ - METN_ECOLI -
6 PsiBlast_PDB 91.8339%-120 - C1 -3TIF - Y796_METJA -
1 PsiBlast_PDB 91.5040%-118 - C1 -3DHW - METN_ECOLI -
5 PsiBlast_PDB 91.4940%-120 - C1 -1L2T - Y796_METJA -
9 PsiBlast_PDB 90.1540%-121 - C1 -1F3O - Y796_METJA -
125 Fugue 87.3939%-114 - C1 -3TUZ - METN_ECOLI -
127 Fugue 83.0338%-105 - C1 -1Z47 - ? -
11 PsiBlast_PDB 82.8339%-106 - C1 -2IT1 - ? -
45 PsiBlast_CBE 82.7836%-125 - C1 -2OUK - ? -
51 PsiBlast_CBE 82.4836%-121 - C1 -2OLJ - ? -
85 PsiBlast_CBE 68.8736%-108 - C1 -4U00 4.2 ?
96 PsiBlast_CBE 64.2532%-109 - C1 -3FVQ 6.9 FBPC_NEIG1
86 PsiBlast_CBE 63.6634%-119 - C1 -1VCI 3.5 ?
95 PsiBlast_CBE 63.1332%-107 - C1 -3FVQ 7.4 FBPC_NEIG1
88 PsiBlast_CBE 60.9431%-114 - C1 -4MKI 2.1 ECFA2_CALS4
87 PsiBlast_CBE 60.3231%-113 - C1 -4MKI 2.3 ECFA2_CALS4