@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3758c: (2016-05-22 )
MICFDDVSKVYAHGATAVDRLTLEVPNGMLTVFVGPSGCGKTTALRMINRMVDPTSGTITVDGTDVSTVNAVKLRLGIGYVIQNAGLMPHQRVIDNVATVPVLKGQPRRAARKAGYEVLERVGLDPKVATRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDPVVRHELQNEILRLQAELHKTIVFVTHDIDEALKLADLVAVFAPGGALAQYDETARLLSSPANDFVSKFIGLGRGYRWLQLFDAAGLPVRDIEQVSVNGLSDARDRQVRDGWVLVVDGAGAPLGWIDADGRRRHRGGAALSDAMTVGGSVFRPNGNLSQALDAALSSPSGVGVAVDGGGKVIGGILAADVLAEFQKGKKAGGGAKPCTT

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




106 Fugue 80.4130% -88 - C1 -1Z47 - ? -
114 HHSearch 75.0738%-115 - C1 -1Z47 - ? -
116 HHSearch 75.0338%-129 - C1 -1V43 - ? -
22 PsiBlast_CBE 74.5738%-119 - C1 -1Z47 - ? -
6 PsiBlast_PDB 73.9138%-123 - C1 -1VCI 3.9 ?
1 PsiBlast_PDB 73.7440%-112 - C1 -2IT1 - ? -
7 PsiBlast_PDB 73.5738%-125 - C1 -1V43 - ? -
115 HHSearch 73.4339%-117 - C1 -2IT1 - ? -
3 PsiBlast_PDB 73.1238%-116 - C1 -1Z47 - ? -
21 PsiBlast_CBE 72.7540%-117 - C1 -2IT1 - ? -
121 HHSearch 72.0340%-124 - C1 -2YYZ - ? -
123 HHSearch 71.4634%-117 - C1 -3TUI - METN_ECOLI -
38 PsiBlast_CBE 70.7035%-126 - C1 -3PUZ - MALK_ECOLI -
105 Fugue 70.6428% -99 - C1 -3TUZ - METN_ECOLI -
113 HHSearch 70.5137%-127 * C1 *4TQU - ? -
10 PsiBlast_PDB 70.3934%-117 - C1 -3TUZ - METN_ECOLI -
119 HHSearch 70.3635%-121 - C1 -3RLF - MALK_ECOLI -
9 PsiBlast_PDB 69.9034%-115 - C1 -3TUI - METN_ECOLI -
47 PsiBlast_CBE 69.7735%-125 - C1 -3PUV - MALK_ECOLI -
42 PsiBlast_CBE 69.1735%-121 - C1 -3PUX - MALK_ECOLI -
90 PsiBlast_CBE 66.0037%-120 - C1 -3FVQ 5.4 FBPC_NEIG1
91 PsiBlast_CBE 64.6337%-118 - C1 -3FVQ 4.6 FBPC_NEIG1
18 PsiBlast_PDB 64.4635%-107 - C1 -4YMV 5.3 ?
17 PsiBlast_PDB 63.9935%-109 - C1 -4YMU 5.8 ?
32 PsiBlast_CBE 63.9135%-106 - C1 -4YMV 5.9 ?
33 PsiBlast_CBE 62.7035%-111 - C1 -4YMU 5.8 ?
4 PsiBlast_PDB 62.5540%-105 - C1 -4U00 4.2 ?
60 PsiBlast_CBE 58.8036%-107 - C1 -3C4J 4.3 ?
69 PsiBlast_CBE 57.8936%-106 - C1 -2OLK 4.1 ?
73 PsiBlast_CBE 57.3836%-105 - C1 -2OLJ 3.8 ?
68 PsiBlast_CBE 57.1936%-107 - C1 -2OLK 4.0 ?
61 PsiBlast_CBE 57.0836%-101 - C1 -3C4J 4.7 ?
70 PsiBlast_CBE 56.0336%-106 - C1 -2OLK 3.8 ?
75 PsiBlast_CBE 55.7236%-103 - C1 -3C41 5.2 ?
71 PsiBlast_CBE 55.5036%-104 - C1 -2OLK 3.9 ?
74 PsiBlast_CBE 55.1836%-103 - C1 -3C41 3.9 ?
62 PsiBlast_CBE 54.7236% -99 - C1 -2Q0H 3.6 ?
63 PsiBlast_CBE 54.0536%-102 - C1 -2Q0H 3.5 ?
72 PsiBlast_CBE 53.1736%-100 - C1 -2OLJ 3.6 ?
78 PsiBlast_CBE 49.8235% -96 - C1 -1L2T 6.7 Y796_METJA
80 PsiBlast_CBE 49.3034%-101 - C1 -3TIF 7.4 Y796_METJA
82 PsiBlast_CBE 49.0734% -97 - C1 -1B0U 3.8 HISP_SALTY
81 PsiBlast_CBE 48.5534% -97 - C1 -3TIF 6.2 Y796_METJA
79 PsiBlast_CBE 48.0235% -95 - C1 -1L2T 6.7 Y796_METJA