@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2740: (2016-02-10 )
MENLDALVSQALEAVRHTEDVNALEQIRVHYLGKKGELTQVMKTLGDLPAEERPKVGALINVAKEKVQDVLNARKTELEGAALAARLAAERIDVTLPGRGQLSGGLHPVTRTLERIEQCFSRIGYEVAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYFNANMLLRTHTSPVQVRTMESQQPPIRIVCPGRVYRCDSDLTHSPMFHQVEGLLVDEGVSFADLKGTIEEFLRAFFEKQLEVRFRPSFFPFTEPSAEVDIQCVICSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSNIDPEKFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLGQFR

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]



FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]



YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]



FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]



FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]



PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]



PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]



200_A_5(2AKW)
SYFA_THETH
[Raw transfer]



GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]



GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]



DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]



MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]
1 PsiBlast_PDB 93.64100%-120 - C2 -4P71 - SYFA_PSEAE -
3 PsiBlast_PDB 91.68100%-121 - C2 -4P73 - SYFA_PSEAE -
5 PsiBlast_PDB 90.73100%-117 - C2 -4P75 - SYFA_PSEAE -
23 PsiBlast_CBE 90.56100%-123 - C2 -4P73 - SYFA_PSEAE -
4 PsiBlast_PDB 90.49100%-118 - C2 -4P74 - SYFA_PSEAE -
2 PsiBlast_PDB 90.09100%-118 - C2 -4P72 - SYFA_PSEAE -
24 PsiBlast_CBE 89.73100%-120 - C2 -4P72 - SYFA_PSEAE -
21 PsiBlast_CBE 89.42100%-121 - C2 -4P75 - SYFA_PSEAE -
22 PsiBlast_CBE 89.09100%-123 - C2 -4P74 - SYFA_PSEAE -
47 Fugue 81.7350% -92 - C2 -1EIY - SYFA_THET8 -
25 PsiBlast_CBE 81.2065% -95 - C2 -3PCO - ? -
26 PsiBlast_CBE 80.9257%-109 - C2 -2RHS - SYFA_STAHJ -
10 PsiBlast_PDB 80.7445% -94 - C2 -1EIY - SYFA_THET8 -
27 HHSearch 80.3268%-107 - C2 -3PCO - ? -
6 PsiBlast_PDB 79.8965%-111 - C2 -3PCO - ? -
29 HHSearch 78.1957%-112 - C2 -2RHQ 7.3 SYFA_STAHJ
7 PsiBlast_PDB 77.9257%-111 - C2 -2RHQ 7.3 SYFA_STAHJ
18 PsiBlast_PDB 77.7546%-101 - C2 -2ALY 9.7 SYFA_THETH
17 PsiBlast_PDB 77.3846%-105 - C2 -2AKW 4.4 SYFA_THETH
14 PsiBlast_PDB 77.2145%-103 - C2 -3HFZ 4.3 SYFA_THET8
19 PsiBlast_PDB 76.9946%-108 - C2 -2AMC 3.7 SYFA_THETH
15 PsiBlast_PDB 76.9845%-105 - C2 -3TEH 3.3 SYFA_THETH
16 PsiBlast_PDB 75.8445%-105 - C2 -4TVA 4.7 SYFA_THETH
12 PsiBlast_PDB 75.4145%-105 - C2 -1JJC 10.0 SYFA_THET8
28 HHSearch 74.4650%-103 - C2 -1B7Y 8.9 SYFA_THETH
9 PsiBlast_PDB 73.7345%-102 - C2 -1B7Y 8.9 SYFA_THETH
11 PsiBlast_PDB 73.4345% -98 - C2 -1B70 4.1 SYFA_THETH
51 Fugue 64.2632% -93 - C2 -3CMQ 7.0 SYFM_HUMAN
32 HHSearch 63.3833% -99 - C2 -3CMQ 7.3 SYFM_HUMAN
20 PsiBlast_PDB 58.9730% -98 - C2 -3CMQ 7.0 SYFM_HUMAN