@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2967: (2016-02-12 )
MSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_C_12(4AG3)
FABG_PSEAE
[Raw transfer]



NDP_A_5(4AG3)
FABG_PSEAE
[Raw transfer]



NAP_B_14(1Q7B)
FABG_ECOLI
[Raw transfer]



NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]



NAP_C_15(1Q7B)
FABG_ECOLI
[Raw transfer]



NAP_D_16(1Q7B)
FABG_ECOLI
[Raw transfer]



NAP_A_13(1Q7B)
FABG_ECOLI
[Raw transfer]



NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]



NAP_A_8(3RSH)
FABG_VIBCH
[Raw transfer]



NAP_D_7(4JRO)
?
[Raw transfer]



NAP_C_6(4JRO)
?
[Raw transfer]



NAP_A_5(3TZC)
?
[Raw transfer]



NDP_B_6(4WK6)
?
[Raw transfer]



NDP_D_8(4WK6)
?
[Raw transfer]



NDP_C_7(4WK6)
?
[Raw transfer]



NAP_E_5(1Q7C)
FABG_ECOLI
[Raw transfer]



NDP_A_5(4WK6)
?
[Raw transfer]



NAP_G_7(1Q7C)
FABG_ECOLI
[Raw transfer]



GOL_A_3(3GED)
?
[Raw transfer]



PGE_B_24(3RRO)
FABG_VIBCH
[Raw transfer]



PGE_A_8(3RRO)
FABG_VIBCH
[Raw transfer]
55 PsiBlast_CBE 94.14100%-118 - C1 -4BNW - FABG_PSEAE -
9 PsiBlast_PDB 94.00100%-118 - C1 -4BNZ - FABG_PSEAE -
43 PsiBlast_CBE 93.69100%-116 - C1 -4BO0 - FABG_PSEAE -
26 PsiBlast_CBE 93.55100%-126 - C1 -4BO7 - FABG_PSEAE -
48 PsiBlast_CBE 93.37100%-123 - C1 -4BNZ - FABG_PSEAE -
39 PsiBlast_CBE 93.16100%-117 - C1 -4BO2 - FABG_PSEAE -
7 PsiBlast_PDB 93.00100%-120 - C1 -4BNX - FABG_PSEAE -
53 PsiBlast_CBE 92.91100%-123 - C1 -4BNX - FABG_PSEAE -
52 PsiBlast_CBE 92.86100%-120 - C1 -4BNX - FABG_PSEAE -
3 PsiBlast_PDB 92.82100%-122 - C1 -4BNT - FABG_PSEAE -
54 PsiBlast_CBE 92.78100%-122 - C1 -4BNX - FABG_PSEAE -
49 PsiBlast_CBE 92.75100%-117 - C1 -4BNY - FABG_PSEAE -
32 PsiBlast_CBE 92.72100%-118 - C1 -4BO5 - FABG_PSEAE -
37 PsiBlast_CBE 92.60100%-120 - C1 -4BO3 - FABG_PSEAE -
15 PsiBlast_PDB 92.60100%-123 - C1 -4BO7 - FABG_PSEAE -
4 PsiBlast_PDB 92.59100%-119 - C1 -4BNU - FABG_PSEAE -
29 PsiBlast_CBE 92.38100%-122 - C1 -4BO6 - FABG_PSEAE -
61 PsiBlast_CBE 92.33100%-119 - C1 -4BNU - FABG_PSEAE -
58 PsiBlast_CBE 92.31100%-118 - C1 -4BNV - FABG_PSEAE -
14 PsiBlast_PDB 92.29100%-122 - C1 -4BO4 - FABG_PSEAE -
2 PsiBlast_PDB 90.25100%-100 - C1 -4AG3 13.0 FABG_PSEAE
68 PsiBlast_CBE 90.11100%-100 - C1 -4AG3 12.9 FABG_PSEAE
78 PsiBlast_CBE 75.7464%-100 - C1 -3RSH 12.0 FABG_VIBCH
76 PsiBlast_CBE 73.1164%-101 - C1 -4I08 10.8 FABG_VIBCH
72 PsiBlast_CBE 72.1664% -97 - C1 -1Q7B 8.2 FABG_ECOLI
87 PsiBlast_CBE 71.6663%-111 - C1 -4WK6 5.6 ?
73 PsiBlast_CBE 71.3864% -98 - C1 -1Q7B 9.2 FABG_ECOLI
77 PsiBlast_CBE 70.9964%-100 - C1 -3RSH 10.9 FABG_VIBCH
19 PsiBlast_PDB 70.9264% -96 - C1 -1Q7B 9.1 FABG_ECOLI
86 PsiBlast_CBE 70.7863%-106 - C1 -4WK6 4.8 ?
84 PsiBlast_CBE 70.5363%-113 - C1 -3TZC 6.0 ?
79 PsiBlast_CBE 70.2664%-100 - C1 -3RRO 1.9 FABG_VIBCH
74 PsiBlast_CBE 69.9164% -98 - C1 -1Q7B 10.0 FABG_ECOLI
80 PsiBlast_CBE 69.8464%-100 - C1 -3RRO 2.1 FABG_VIBCH
85 PsiBlast_CBE 69.6063%-112 - C1 -4WK6 5.9 ?
20 PsiBlast_PDB 69.0763% -99 - C1 -1Q7C 5.6 FABG_ECOLI
103 PsiBlast_CBE 68.9053% -98 - C1 -4JRO 12.4 ?
75 PsiBlast_CBE 68.1363% -96 - C1 -1Q7C 5.4 FABG_ECOLI
88 PsiBlast_CBE 68.0563%-107 - C1 -4WK6 4.3 ?
102 PsiBlast_CBE 65.0353% -95 - C1 -4JRO 11.0 ?