@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4794: (2016-03-01 )
MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLEP

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CLS_A_6(4KOX)
?
[Raw transfer]



CSC_A_15(4KOY)
?
[Raw transfer]



EPE_A_6(4M3S)
?
[Raw transfer]



COA_A_5(4L8A)
?
[Raw transfer]



CLM_A_6(4OAD)
?
[Raw transfer]



CLM_A_8(4OAE)
?
[Raw transfer]



EDO_A_7(4KOW)
?
[Raw transfer]



EDO_A_9(4KUA)
?
[Raw transfer]



EDO_A_12(4KUB)
?
[Raw transfer]



EDO_A_8(4L89)
?
[Raw transfer]



EDO_A_7(4KLV)
?
[Raw transfer]



EDO_A_6(3KKW)
?
[Raw transfer]



EDO_A_6(3KKW)
?
[Raw transfer]
2 PsiBlast_PDB 99.25100%-145 - C2 -3PGP - ? -
10 PsiBlast_PDB 98.94100%-146 - C2 -4KOW 2.4 ?
6 PsiBlast_PDB 98.84100%-145 - C2 -4KOS - ? -
5 PsiBlast_PDB 98.69100%-144 - C2 -4KOR - ? -
13 PsiBlast_PDB 98.63100%-142 - C2 -4KUA 2.7 ?
11 PsiBlast_PDB 98.56100%-143 - C2 -4KOX 8.0 ?
17 PsiBlast_PDB 98.45100%-140 - C2 -4OAD 5.1 ?
4 PsiBlast_PDB 98.43100%-143 - C2 -4KLW - ? -
8 PsiBlast_PDB 98.35100%-144 - C2 -4KOU - ? -
30 Fugue 98.28100%-140 - C2 -3KKW 2.1 ?
9 PsiBlast_PDB 98.24100%-143 - C2 -4KOV - ? -
7 PsiBlast_PDB 98.18100%-141 - C2 -4KOT - ? -
3 PsiBlast_PDB 98.16100%-142 - C2 -4KLV 3.0 ?
16 PsiBlast_PDB 98.12100%-142 - C2 -4L8A 8.4 ?
1 PsiBlast_PDB 98.04100%-140 - C2 -3KKW - ? -
12 PsiBlast_PDB 98.03100%-139 - C2 -4KOY 6.9 ?
14 PsiBlast_PDB 97.69100%-145 - C2 -4KUB 3.2 ?
15 PsiBlast_PDB 97.16100%-140 - C2 -4L89 2.1 ?
40 HHSearch 96.65100%-139 - C2 -3KKW 2.1 ?
18 PsiBlast_PDB 96.3798%-138 - C2 -4OAE 5.3 ?
19 PsiBlast_PDB 95.6296%-141 - C2 -4M3S 4.1 ?