@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LICA1_HAEIN_: (2019-02-05 )
MTNQNVLLNISGVKFVLRIPNAVNLSLINREYEAFNNAQAYRAGLNVETPVLDAKSGVKLTRYLENSNTLSQIQLNEQSCLSQVVNNLYRLHNSEFVFRNVFSVFDEFRQYFSLLENKSAFYQADSRMDKLSAVFWQFEEINKEVILRPCHNDLVPENMLLQDDRLFFIDWEYSGLNDPLFDIATIIEEAHLSKEAADFLLETYCNQTNKYHKTEFQIAHKRLKIHRFCQNVLWFLWTKVKEEHGENFGDYALKRLDAAFKLLEELP

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PT3_A_6(3MES)
?
[Raw transfer]



AMP_A_3(4R78)
?
[Raw transfer]



AMP_A_3(4R78)
?
[Raw transfer]



PT3_B_12(3MES)
?
[Raw transfer]



ADP_A_3(3MES)
?
[Raw transfer]



EDO_A_10(5FTG)
CHKA_HUMAN
[Raw transfer]



ADP_B_9(3MES)
?
[Raw transfer]



GMP_A_2(5IGI)
?
[Raw transfer]



PQ7_A_11(5FUT)
CHKA_HUMAN
[Raw transfer]



NBR_A_2(5FTG)
CHKA_HUMAN
[Raw transfer]
1 PsiBlast_PDB 87.5131% -41 - C3 -4R77 - ? -
2 PsiBlast_PDB 84.8931% -33 - C3 -4R78 4.2 ?
3 PsiBlast_PDB 83.7931% -33 - C3 -4R7B - ? -
42 HHSearch 82.5731% -17 - C3 -4R7B - ? -
41 HHSearch 82.3631% -15 - C3 -4R78 4.3 ?
48 HHSearch 81.4427% -7 - C3 -3DXQ - ? -
47 HHSearch 80.0427% -9 - C- -3DXQ - ? -
4 PsiBlast_PDB 78.4727% -44 - C- -3DXQ - ? -
26 Fugue 71.5520% 1 - C3 -1NW1 - CKA2_CAEEL -
62 SP3 69.2818% -10 - C3 -1NW1 - CKA2_CAEEL -
43 HHSearch 69.1819% -2 - C3 -1NW1 - CKA2_CAEEL -
44 HHSearch 68.2719% -2 - C3 -1NW1 - CKA2_CAEEL -
54 HHSearch 67.7519% 4 - C3 -5FTG 4.7 CHKA_HUMAN
52 HHSearch 66.6419% 2 - C3 -3MES 5.0 ?
49 HHSearch 66.5319% -21 - C3 -3C5I - ? -
53 HHSearch 64.5519% 19 - C3 -5FUT 4.8 CHKA_HUMAN
51 HHSearch 63.7619% 11 - C3 -3MES 4.6 ?
50 HHSearch 61.8419% 0 - C3 -3C5I - ? -
45 HHSearch 59.7321% 40 * C3 *2QG7 - ? -
27 Fugue 57.4319% 24 - C3 -2QG7 - ? -
58 HHSearch 55.5717% -3 - C3 -5IGI 3.8 ?