@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : 87_120_113390T0_kcl58: (2019-03-28 )
HECFTTIHAKTPFRSSYSPEYYKASLLQMRPGEDYYFKNPSPFEGCLVKFDEECTQLIWERLFDFP
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....--------....-10.----------.......-20........-----30.------.--..-....40...-----.-----.-------...50----........----.60..-...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HE
C
F
T
--------
T
IHA-KTP----------FRSSYS
P
-
E
Y
Y
K
A
S
L
LQM-----RPG------E--DY-YFKNPSPF
E
-----
G
-----
C
-------
L
V
K
F
-----
D
E
E
C
T
Q
L
I
----
W
E
R
LF-DFP
40
Fugue
62.39
29%
24
- C6 -
0.14
4UG4
-
BETC_RHIME
A:
[1-515]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDPVTTGKPNILIIMVDQLNGKLFPDGPADFLHAPNLKALAKRSARFHNNYTSSPLCAPARASFMAGQLPSRTRVYDNAAEYQSSIPTYAHHLRRAGYYTALSGKMHFVGPDQLHGF
E
E
R
L
T
--------
T
--
D
-
I
Y
P
----------
A
D
F
G
W
T
P
-
D
Y
R
K
------------
P
G
------
E
RI
D
W
-
W
Y
H
N
L
G
S
V
T
-----
G
-----
A
GVAEITN
Q
M
E
Y
-----
D
D
E
V
A
F
L
A
----
N
Q
K
L
Y
-
Q
L
S
27
SP3
61.23
18%
46
- C6 -
-
1ACC
-
?
?:
[14-735]
SSSQGLLGYYFSDLNFQAPMVVTSSTTGDLSIPSSELENIPSENQYFQSAIWSGFIKVKKSDEYTFATSADNHVTMWVDDQEVINSNKIRLEKGRLYQIKIQYQRENPTEKGLDFKLYWTDSQNKKEVISSDNLQLPELKQKSSVPDRDNDGIPDSLEVEGYTVDVKNKRTFLSPWISNIHEKKGLTKYKSSPEKWSTASDPYSDFEKVTGRIDKNVSPEARHPLVAAYPIVHVDMENIILSKNETISKNTSTSRTHTSEVVSAGFSNSNSSTVAIDHSLSLAGGLNTADTARLNANIRYVNTGTAPIYNVLPTTSLVLGKNQTLATIKAKENQLSQILAPNNYYPSKNLAPIALNAQDDFSSTPITMNYNQFLELEKTKQLRLDTDQVYGNIATYNFENGRVRVDTGSNWSEVLPQIQETTARIIFNGKDL
N
L
V
E
R
--------
R
I
A
A
-
V
N
P
------------
S
T
T
K
P
-
D
M
T
L
K
E
A
L
K
I
AFGFN
E
P
N
------
G
--
N
L
-
Q
Y
-
Q
G
K
D
I
T
-----
E
-----
F
-------
D
F
N
F
-----
D
Q
Q
T
S
Q
N
I
----
K
N
Q
L
A
-
E
L
N
30
SP3
57.08
13%
-10
- C6 -
0.37
1RLM
2
SUPH_ECOLI
A:
[2-270]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDK
Q
L
N
F
V
--------
A
C
G
L
-
Q
S
A
----------
Y
V
S
E
N
A
P
-
E
A
F
V
A
L
M
A
K
H
-----
Y
H
R
LKP---
V
--
K
D
-
Y
Q
E
I
D
D
V
L
F
-----
K
-----
F
-------
S
L
N
L
-----
P
D
E
Q
I
P
L
V
----
I
D
K
L
H
-
V
A
L
47
Fugue
53.50
20%
6
- C6 -
0.12
5TDW
-
A:
[1-69]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GI
I
T
C
I
C
DLNDDDGF
T
I
Q
C
-
D
H
C
----------
N
R
W
Q
H
A
I
-
C
Y
G
I
K
D
-
I
G
M
-----
A
P
-------
D
--
D
Y
-
L
C
N
S
C
D
P
----------------------
R
E
V
-----
D
I
N
L
A
R
K
I
----
Q
Q
E
R
I
-
N
V
K
36
Fugue
50.02
15%
-0
- C6 -
0.27
3FBL
-
Y132_AFV1Y
A:
[1-82]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y
H
K
L
R
L
--------
A
I
K
E
-
I
C
K
TDGIPNIKWG
M
Y
I
A
F
G
E
-
K
L
L
K
S
Y
L
K
M
K
-----
A
G
S
ASSDMI
A
--
E
Y
-
I
N
N
A
I
S
A
F
S
-----
S
-----
R
--------
T
G
I
-----
S
Q
E
T
A
Q
K
I
----
A
D
F
I
T
-
S
N
Y
38
Fugue
48.62
16%
-31
- C6 -
0.24
1HA8
-
MER23_EUPRA
A:
[1-51]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEC
E
Q
C
F
S
--------
D
----------------------------------
G
-----
G
D
C
------
T
--
T
C
-
F
N
N
G
T
G
P
C
A
-----
N
-----
C
-------
L
A
G
Y
PAGCS
N
S
D
C
T
A
F
L
----
S
Q
C
Y
G
-
G
C
-
45
Fugue
48.56
22%
54
- C5 -
-
2YUB
-
A:
[1-118]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGVQDQLPYSVTLISMPATTECRRGFSVTVESAS
S
N
Y
A
T
--------
T
V
Q
V
-
K
E
V
----------
N
R
M
H
I
S
P
-
N
N
R
N
A
----
I
-----
H
P
G
------
D
--
R
I
-
L
E
I
N
G
T
P
V
R
-----
T
-----
L
-------
R
V
E
E
-----
V
E
D
A
I
K
Q
T
----
S
Q
T
L
Q
-
L
L
I
39
Fugue
45.25
6%
84
- C6 -
0.26
3EAB
-
SPAST_HUMAN
A:
[108-196]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGSMEAERVRVFHKQAFEYI
S
I
A
L
R
--------
I
D
E
D
-
E
K
A
----------
G
Q
K
E
Q
A
V
-
E
W
Y
K
K
G
I
E
E
L
-----
E
K
G
------
I
--
A
V
-
I
V
T
G
Q
G
E
Q
C
-----
E
-----
R
-------
A
R
R
L
-----
Q
A
K
M
M
T
N
L
----
V
M
A
K
D
-
R
L
Q
25
SP3
43.60
21%
-29
- C2 -
-
1G72
1
DHM1_METME
A:
[3-573]
---------------------------DADLDKQVNTAGAWPIATGGYYSQHNSPLAQINKSNVKNVKAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLN
H
I
C
M
D
--------
W
E
P
F
-
M
L
P
----------
Y
R
A
G
----
Q
F
F
V
G
A
T
L
A
M
-----
Y
P
G
------
P
--
N
G
-
P
T
K
K
E
M
--------
G
-----
Q
-------
I
R
A
F
-----
D
L
T
T
G
K
A
K
----
W
T
K
W
E
-
K
F
A
41
Fugue
41.13
23%
76
- C4 -
-
2W1K
2
?
A:
[4-211]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQVKGHATFVKSMTTEMYQEQQNHSLAYNQRLASQNRIVDPFLAEGYEVNYQVSDDPDAVYGYLSIPSLEIMEPVYLGADYHHLGMGLAHVDGTPLPLD
G
T
G
I
R
--------
S
V
I
A
---
G
----------
H
R
A
E
P
S
H
-
V
F
F
R
-
H
L
D
Q
L
-----
K
V
G
------
D
--
A
L
-
Y
Y
D
N
G
Q
--------------
E
-------
I
V
E
Y
-----
Q
M
M
D
T
E
I
I
LPSE
W
E
K
L
E
-
S
V
S
31
SP3
40.68
10%
54
- C6 -
0.26
1WR8
-
PGP_PYRHO
A:
[2-231]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAE
D
G
G
A
I
--------
S
Y
K
K
-
K
R
I
----------
F
L
A
S
M
D
E
E
W
I
L
W
N
E
I
R
K
R
-----
F
P
N
------
A
--
R
T
-
S
Y
T
M
P
D
R
R
A
-----
G
-----
L
-------
V
I
M
R
-----
E
T
I
N
V
E
T
V
----
R
E
I
I
N
-
E
L
N
9
HHSearch
40.56
46%
-713
- C8 -
-
4PA5
1
TGL_BACSU
B:
[164-176]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
-----
F
L
G
------
D
--
C
L
-
Y
F
K
N
P
E
----------------------------------------------------
10
HHSearch
40.34
46%
-713
- C8 -
-
4P8I
-
TGL_BACSU
A:
[164-176]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
-----
F
L
G
------
D
--
C
L
-
Y
F
K
N
P
E
----------------------------------------------------
1
PsiBlast_PDB
40.20
52%
-79
* C7 *
-
2RTX
-
ARFB_ECOLI
A:
[35-57]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
--------
A
I
H
L
-
R
F
D
----------
I
R
A
S
S
L
P
-
E
Y
Y
K
E
R
L
L
--------------------------------------------------------------------------------
21
HHSearch
38.91
27%
274
- C6 -
0.26
1B35
-
?
C:
[235-277]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
C
E
V
-----
N
G
G
------
P
--
D
L
-
E
F
A
G
P
T
C
P
R
YVPYA
G
DFTLA
D
-------
T
R
K
I
-----
E
A
E
R
T
Q
E
Y
-------------
28
SP3
38.62
7%
27
- C6 -
0.34
1IBJ
2
METC_ARATH
A:
[85-464]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHA
Q
G
A
L
V
--------
L
V
D
N
-
S
I
M
----------
S
P
V
L
S
R
P
-
L
E
L
G
A
D
I
V
M
H
------
S
A
------
T
--
K
F
-
I
A
G
H
S
D
V
M
A
-----
G
-----
V
-------
L
A
V
K
-----
G
E
K
L
A
K
E
V
----
Y
F
L
Q
N
-
S
E
G
13
HHSearch
36.92
45%
-258
- C1 -
-
1YUK
-
ITB2_HUMAN
A:
[83-93]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
Y
L
-----
R
P
G
------
Q
--
A
A
-
A
F
--------------------------------------------------------
42
Fugue
36.06
17%
-27
- C6 -
5ABS
-
A:
[1-66]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
H
M
E
P
A
----------
A
S
S
Q
A
A
V
-
E
E
L
R
T
Q
V
R
E
L
-----
R
S
I
------
I
--
E
T
M
K
D
Q
Q
K
R
E
I
K
-----
Q
-----
L
-------
L
S
E
L
-----
D
E
E
--
K
K
I
----
R
L
R
L
Q
M
E
V
N
8
HHSearch
35.88
25%
-351
- C8 -
-
1SHX
-
EFNA5_MOUSE
B:
[101-116]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
E
F
-----
R
P
G
------
R
--
E
Y
-
F
Y
I
S
S
A
I
---------------------------------------------------
15
HHSearch
35.25
25%
-185
- C9 -
-
4PNO
1
?
A:
[23-47]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
I
-
Y
L
V
N
G
I
K
L
Q
-----
G
-----
Q
-------
I
E
S
F
-----
D
Q
F
V
I
L
L
--------------