@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B2_106330T0_kcl70: (2019-03-28 )
GCSASILKYDANGGQETYYGSALPANGSIAFQPTEFGTEVVISVDANCNPTNTDDVKKSVPKGWGLH
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..--..-.....10..---------.-----..-..----.--20-....----....---------.-30.....---.---.-.-40..----..-....50........60---------..-..---...--------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC--S
A
-
S
I
L
K
YDANG---------G-----QE-TY----Y--G--SALP----AN
G
S
---------
I
-
A
F
QPTEF---G---
T
-
E
-
V
V
I
S
----
V
D-ANCNPT
N
T
D
D
V
K
K
SV----------PK-GW---GLH--------------------------------------------------------------------------------------------
20
Fugue
63.16
18%
-90
* C6 *
-
2MM2
-
?
A:
[1-65]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
--
T
A
-
N
I
L
N
I
N
-------------------
E
-
V
V
----
I
--
A
--
T
G
C
V
----
P
A
G
G
---------
N
-
L
I
I
R
V
G
S
---
D
---
H
-
S
-
Y
L
I
R
----
A
T
-
V
S
C
G
L
S
L
N
P
S
--
Q
S
F
----------
I
N
-
G
E
---
S
L
A
S
G
G
R
C---------------------------------------------------------------------------------------
43
SP3
62.17
19%
76
- C5 -
0.23
1MMS
-
RL11_THEMA
A:
[70-139]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
T
P
--
P
A
-
S
F
L
L
K
K
A
A
G
---------
I
-----
E
K
----------
G
--
S
S
E
P
----
K
R
K
I
---------
V
-
G
K
V
T
R
K
Q
---
I
---
E
-
E
-
I
A
K
T
----
K
M
-
P
D
L
N
A
N
S
L
E
A
A
M
K
I
I
E
G
T
-------
A
K
-
S
M
---
G
I
E
VV------------------------------------------------------------------------------------------
28
Fugue
61.95
15%
22
- C5 -
0.47
1MPG
1
3MG2_ECOLI
A:
[1-99]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
Y
T
L
N
W
Q
P
PYD
W
S
W
--
M
L
-
G
F
L
A
A
R
A
V
S
---------
S
-----
V
E
-
T
V
A
DS
Y
Y
--
A
--
R
S
L
A
----
V
G
E
Y
R
G
V
------
V
-
T
A
I
P
D
I
A
---
R
---
H
-
T
-
L
H
I
N
----
L
S
-
A
G
-
L
E
P
V
A
A
E
C
L
A
K
M
----------
S
R
-
L
F
---
D
L
Q
CN
P
Q
I
V
N
G
A
L
GRLG------------------------------------------------------------------------------
44
SP3
61.86
19%
31
- C6 -
-
1CVR
-
CPG2_PORGI
A:
[351-432]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
E
M
Q
V
T
A
P
ANISASAQ
T
F
E
V
A
C
DY
N
G
-
A
I
A
T
L
S
D
D
G
------------------
D
M
----
V
--
G
--
T
A
I
V
----
K
D
G
K
---------
A
-
I
I
K
L
N
E
S
IAD
E
---
T
-
N
-
L
T
L
T
----
V
V
-
G
Y
N
K
V
T
V
I
K
D
V
K
V
E
------------------------------------------------------------------------------------------------------------------
41
SP3
59.47
16%
58
- C5 -
0.49
1MWY
-
ZNTA_ECOLI
A:
[2-74]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
-
T
R
Y
S
W
K
V
S
G
MDCA-----
A
-----
C
A
-
R
K
----
V
--
E
--
N
A
V
R
----
Q
L
A
G
---------
V
-
N
Q
V
Q
V
L
F
---
A
---
T
E
K
-
L
V
V
D
----
A
D
-----
N
D
I
R
A
Q
V
E
S
A
L
----------
Q
K
A
G
Y
---
S
L
R
DEQAAE--------------------------------------------------------------------------------------
42
SP3
59.42
14%
68
- C5 -
-
1AW0
-
?
?:
[1-72]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L
T
Q
E
T
V
I
N
I
D
GMTC
N
S
C
--
V
Q
-
S
I
----------------------
E
G
-
V
I
----------
S
K
K
P
----
G
V
K
S
---------
I
-
R
V
S
L
A
N
--------
S
-
N
-
G
T
V
E
----
Y
D
-
P
--
L
L
T
S
P
E
T
L
R
G
A
I
----------
E
D
M
G
F
---
D
A
T
LSD-----------------------------------------------------------------------------------------
24
Fugue
57.61
16%
41
- C5 -
0.30
4PWU
1
MZRA_KLEP7
A:
[3-78]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
Q
--
Q
E
-
A
T
L
A
I
R
P
V
G
---------
Q
GIGMP
D
G
-
F
S
----
V
--
W
--
H
H
L
D
----
A
N
G
I
---------
R
-
F
K
S
I
T
P
Q
---
K
---
D
-
G
-
L
L
I
K
----
F
D
S
T
A
Q
G
A
A
A
K
E
V
L
G
R
A
L
----------
P
H
-
G
Y
---
I
I
A
L
L
E-----------------------------------------------------------------------------------------
21
Fugue
56.43
28%
44
- C5 -
0.17
4YY2
-
?
A:
[5-103]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKS
P
T
E
V
L
L
E
L
I
A
E
A
S
GTT
R
E
E
V
--
K
E
-
K
F
L
K
E
L
R
K
G
---------
K
-----
S
P
-
T
E
----
V
--
L
--
L
E
L
I
----
A
E
A
S
GTT
K
E
E
V
K
E
K
-
F
L
K
E
L
S
F
---
G
KS
P
T
-
E
-
V
L
L
E
----
L
I
-
A
E
A
S
G
T
T
K
E
E
V
K
K
K
F
----------
W
K
-
E
L
---
S
L
---------------------------------------------------------------------------------------------
39
SP3
56.21
16%
5
- C5 -
0.17
1XXA
3
ARGR_ECOLI
A:
[4-74]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
K
N
-
L
V
L
D
I
D
Y
N
D
A
V
V
V
I
H
T
S
P
G
-----
A
A
-
Q
L
----
I
--
A
--
R
L
L
D
----
S
L
G
K
---------
A
E
G
I
L
G
T
I
A
---
G
---
D
-
D
-
T
I
F
T
----
T
P
-
A
--
N
G
F
T
V
K
D
L
Y
E
A
I
----------
L
E
-
L
F
--------------------------------------------------------------------------------------------------
29
Fugue
56.12
17%
65
- C6 -
-
1GH5
-
?
A:
[1-87]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
I
N
R
T
D
C
--
N
E
N
S
Y
L
E
I
H
N
N
E
---------
G
-----
R
D
-
T
L
----
C
F
A
N
--
A
G
T
M
----
P
V
A
I
---------
Y
-
G
V
N
W
V
E
S
---
G
---
N
-
N
V
V
T
L
Q
----
F
Q
-
R
N
L
S
D
P
R
L
E
T
I
T
L
Q
K
----------
W
G
-
S
W
N
P
G
H
I
H
EIL
S
I
R
I
Y------------------------------------------------------------------------------------
36
SP3
55.59
11%
26
* C5 *
0.35
1CPZ
-
COPZ_ENTHA
A:
[1-68]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
Q
E
F
S
V
KGMSCN
H
C
--
V
A
-
R
I
E
E
------------------------------------
A
V
G
----
R
I
S
G
---------
V
-
K
K
V
K
V
Q
L
---
K
---
K
-
E
K
A
V
V
K
----
F
D
-
E
--
A
N
V
Q
A
T
E
I
C
Q
A
I
----------
N
E
L
G
Y
---
Q
A
E
V
I------------------------------------------------------------------------------------------
35
Fugue
54.67
9%
67
- C2 -
-
3HGT
-
HDA3_YEAST
A:
[27-328]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSG
D
Y
W
L
P
T
T
M
S
L
Y
Q
K
E
L
T
D
Q
I
V
S
L
H
Y
S
D
I
L
R
Y
F
E
T
SHYKE
D
V
I
L
E
S
M
K
T
M
C
L
N
G
S
L
V
A
T
HPYLLIDHYMPKSLITRD
V
P
A
H
L
A
E
N
S
G
K
F
S
V
L
R
D
L
I
N
L
V
Q
E
Y
E
T
E
T
A
I
V
C
R
P
G
R
T
M
D
L
L
E
A
L
L
L
GNK
V
H
I
K
R
YDGHSIDF
S
C
--
T
V
-
H
L
F
S
S
E
G
I
N
---------
F
-----
T
K
-
Y
P
----
I
--
K
--
S
K
A
R
----
F
D
-------------------------------
M
L
I
C
----
L
D
-
T
T
V
D
T
S
Q
-
K
D
I
Q
Y
L
L
----------
Q
Y
-
K
A
---
P
I
V
R
LVAINS
I
D
H
C
R
L
F
F
GKKFDKNS
R
E
Y
L
E
N
V
T
A
A
M
V
I
L
R
DRLGTLPPDL
R
P
I
Y
S
Q
KLHYL
V
E
W
L
E
NPTVPWPLPDI
Y
P
L
K
QYT
S
M
D
V
E
R
S
L
L
T
8
HHSearch
53.35
22%
-84
- C5 -
0.26
1K8K
-
ARPC2_BOVIN
D:
[63-111]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
--
Y
K
-
E
L
Q
A
H
G
A
D
E
---------
L
-----
L
K
-
R
V
----
Y
--
G
--
S
Y
L
----------------------
V
N
P
E
S
---
G
---
Y
-
N
-
V
S
L
L
----
Y
D
-
L
E
N
L
P
A
S
K
D
S
I
V
H
-------------------------------------------------------------------------------------------------------------------
45
SP3
51.94
14%
50
- C6 -
-
1E2W
-
CYF_CHLRE
A:
[169-232]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
Y
N
A
S
A
--
A
G
-
K
I
V
A
I
T
A
L
S
---------
E
-----
K
K
G
G
F
----
E
--
V
--
S
I
E
K
----
A
N
G
E
---------
V
-
V
V
D
K
I
P
A
---
G
---
P
-
D
-
L
I
V
K
EG
Q
T
V
Q
-
A
D
-
Q
P
L
T
N
N
P
----------------------------------------------------------------------------------------------------------------------
30
Fugue
51.04
22%
-28
- C5 -
0.04
2OCC
-
COX7B_BOVIN
K:
[6-54]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
P
---------
D
-----
F
H
-
D
K
----
Y
--
G
--
N
A
V
L
----
A
S
G
A
---------
T
-
F
C
V
A
V
W
V
---
Y
---
M
-
A
-
T
Q
I
G
----
I
E
-
W
N
P
S
P
V
G
-----
R
V
T
----------
P
K
-
E
W
---
R
----------------------------------------------------------------------------------------------
38
SP3
50.15
19%
-9
- C3 -
-
1CKM
-
MCE_PBCV1
A:
[239-327]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TH
H
T
I
D
F
I
IM
S
E
--
D
G
-
T
I
G
I
F
D
P
N
L
---------
R
-----
K
N
-
V
P
----
V
--
G
KL
D
G
Y
Y
----
N
K
G
S
---------
I
-
V
E
C
G
F
A
D
---
G
---
T
-
W
-
K
Y
I
Q
----
G
R
-
S
D
K
N
Q
A
N
D
R
L
T
Y
E
K
T
L
L
N
I
E
E
NIT
I
D
E
-
L
L
---
D
L
F
--------------------------------------------------------------------------------------------
31
Fugue
48.38
13%
115
- C5 -
0.34
2HGS
1
GSHB_HUMAN
A:
[3-474]
TNWGSLLQD
K
Q
Q
L
E
E
L
A
R
Q
A
V
D
R
A
L
A
E
GVLLRTSQEPTSSE
V
V
S
Y
A
P
FTLFPSLVP
S
A
L
L
E
Q
A
Y
A
V
Q
M
D
F
N
L
L
V
D
A
V
S
Q
N
A
A
F
L
E
Q
T
L
S
S
T
I
K
Q
D
D
F
T
A
R
L
F
D
I
H
K
Q
V
L
K
E
GIAQT
V
F
L
G
L
N
R
S
D
Y
M
F
Q
RSADGS
P
A
L
K
Q
IEINTISASF
G
G
L
A
S
R
T
P
A
V
H
R
H
V
L
S
V
L
SK
T
K
E
A
G
K
I
L
S
N
N
P
S
K
G
L
A
L
G
I
A
K
A
W
E
L
Y
GSPN
A
L
V
L
L
I
A
Q
EKERN
I
F
D
Q
R
A
I
E
N
E
L
L
A
R
N
I
H
V
I
R
R
T
F
E
D
I
S
E
K
G
S
L
D
QDR
R
L
F
V
DGQEIA
V
V
Y
F
RDGYMPRQYS
L
Q
N
W
E
A
R
L
L
L
E
R
SHAAKCPD
I
A
T
Q
L
A
G
T
K
K
V
Q
Q
E
L
S
RPG
M
L
E
M
L
L
PGQ
P
E
A
V
A
R
L
R
A
T
F
A
G
L
Y
S
LDVG
E
E
G
D
Q
A
I
A
E
A
L
A
A
P
--
S
R
-
F
V
L
K
P
Q
R
E
G
---------
G
-----
G
N
-
N
L
----
Y
--
G
--
E
E
M
V
----
Q
A
L
K
---------
Q
-
L
K
D
S
E
E
R
---
A
---
S
-
Y
-
I
L
M
E
-----
K
-
I
E
P
E
P
F
E
-
N
C
L
L
R
P
G
----------
S
P
-
A
R
---
V
V
Q
C
I
S
E
L
G
I
F
G
V
Y
V
R
Q
EKTLV
M
N
K
H
V
G
H
L
L
R
T
K
A
IEHADGGVAAG
V
A
V
L
D
N
P
YPV---------------------------------------
40
SP3
46.94
14%
106
- C5 -
-
1AFJ
-
?
?:
[1-72]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
T
Q
T
V
T
L
A
V
PGMTCA
A
C
--
P
I
-
T
V
K
K
------------------------------------
A
L
S
----
K
V
E
G
---------
V
-
S
K
V
D
V
G
F
---
E
---
K
R
E
-
A
V
V
T
----
F
D
-
D
--
T
K
A
S
V
Q
K
L
T
K
A
T
----------
A
D
A
G
Y
---
P
S
S
V
K
Q-----------------------------------------------------------------------------------------
12
HHSearch
46.40
39%
-93
- C4 -
-
5F6C
-
RNE_ECOLI
A:
[286-308]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
L
P
----
S
G
G
S
---------
I
-
V
I
D
S
T
E
A
---
L
---
T
----
A
I
R
----
I
N
-
S
-------------------------------------------------------------------------------------------------------------------------------
37
SP3
44.40
14%
118
- C6 -
-
1BF4
-
DN7D_SULAC
A:
[1-63]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
V
K
F
K
Y
K
G
---------
E
-----
E
K
-
E
V
----
D
--
I
--
S
K
I
K
K
V
W
R
V
G
K
M
---------
I
-
S
F
T
Y
D
E
G
G--
G
---
K
-
T
-
G
R
G
A
----
V
S
-
E
K
D
A
P
K
E
L
L
Q
M
L
E
K
Q
----------
K
K
-----------------------------------------------------------------------------------------------------