@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_103290T0_: (2019-03-28 )
DTNNNRRSCYYTIFHRAGREWRQIRQTITQITPNCVVNNIRGIPKFWVDDDCTPNYQKSEEVYIRVTAEGAKNYPEPPGFPSGCSLRGR
Atome Classification :
(20 SA)
----------------...------......10....---..-------------...-----20..--------...--...30-------.....--.-.--..------40-------..-.----------.---.-----...50---..-.-.--.--...60--.-.--......-.70------------...-----....-..-80-------------..-----------....----..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------DTN------NN
R
R
S
C
Y
-
Y
T
I
F
---
H
R-------------A
G
R
-----
E
W
R
Q
--------
I
R
Q
--
T
I
T
Q--------I
T
P
N
C
--
V
-
V
--NN------IR-------GI-P----------K---F-----WVDDD---CT-P-N--Y--QKS
E
---
E
-
V
--
Y
I
R
V
TA-EG-------------AKN-----YPEP-PG-FP-------------SG-----------CSLR----GR
22
SP3
59.42
20%
-12
* C13 *
-
1V5O
-
DDI1_MOUSE
A:
[1-102]
-----------------
G
S
------
S
G
S
S
G
M
L
-
I
T
V
Y
----
C
-------------
V
R
R
-----
D
L
T
E
--------
V
T
F
--
S
L
-
Q
--------
V
N
P
D
F
--
E
-
L
--
S
N
------
F
R
VLCELES
G
V
-
P
AEEAQIVYME
Q
---
L
-----
L
T
D
D
H
---
C
S
L
G
-
S
--
Y
GL
K
D
G
D
---
M
-
V
--
V
L
L
Q
K
D
----------------
N
V
G
-----
L
R
T
P
-
G
R
-
T
P
-------------
S
G
-----------
P
S
S
G
------
37
Fugue
56.59
16%
54
- C11 -
0.25
2CO5
-
?
A:
[5-96]
-------------------------
K
Y
M
R
I
N
Y
-
Y
I
I
L
---
K
V
-------------
L
V
I
NGSRL
E
K
K
R
--------
L
R
S
--
E
I
L
K
--------
R
F
D
I
D
--
I
S
D
--
G
V
------
L
Y
-------
P
L
-
I
----------
D
---
S
-----
L
I
D
D
K
---
I
L
-
R
-
E
--
E
--
E
A
P
D
---
G
-
K
--
V
L
F
L
T
E
-
K
G
-------------
M
K
E
-----
F
E
E
L
-
H
E
-
F
F
-------------
K
K
-----------
I
V
C
H
----
H
H
32
Fugue
55.97
32%
1
- C11 -
0.28
4AW9
3
LGMN_HUMAN
A:
[1-263]
GGKHWVVIVAGSNGWY
N
Y
R
------
H
Q
A
D
A
C
H
A
Y
Q
I
I
---
H
R
-------------
N
G
I
-----
P
D
E
Q
--------
I
V
V
--
M
M
Y
D
DIAYSEDN
P
T
P
G
I
--
V
-
I
--
N
R
PNGTDV
Y
Q
-------
G
V
-
P
----------
K
---
D
-----
Y
T
G
E
D
---
V
T
-
P
--------
Q
N
F
---
L
-
A
--
V
L
R
G
D
A
-
E
A
-------------
V
K
------------
G
-
I
G
-------------
S
G
-----------
K
V
L
K
----
S
G
27
SP3
54.20
17%
26
- C11 -
0.30
1JID
-
SRP19_HUMAN
A:
[5-118]
------------AARS
P
A
D
------
Q
D
R
F
I
C
I
-
Y
P
A
Y
LNN
K
K
-------------
T
I
A
-----
E
G
R
R
--------
I
P
I
SK
A
V
E
N
--------
P
T
A
T
E
--
I
-
Q
--
D
V
------
C
S
AV-----
G
L
-
N
----------
V
---
F
-----
L
E
K
N
K
---
M
Y
-
S
R
E
--
W
--
N
R
D
V
---
Q
-
Y
RG
R
V
R
V
Q
L
-
K
Q
-------------
E
D
G
-----
S
L
C
L
-
V
Q
-
F
P
-------------
S
R
KSVMLYAAEMI
P
K
L
K
----
T
R
29
SP3
54.14
20%
51
- C10 -
-
1CB8
-
CSLA_PEDHD
A:
[578-677]
-----------PKVLA
N
T
N
QLQAVY
H
Q
Q
L
D
M
V
-
Q
A
I
F
---
Y
T
-------------
A
G
K
-------
L
S
--------
V
A
G
--
I
E
I
E
--------
T
D
K
P
C
AV
L
-
I
--
K
H
------
I
N
-------
G
K
-
Q
----------
V
---
I
-----
W
A
A
D
P
---
L
----
Q
--
K
--
E
K
T
A
---
V
-
L
--
S
I
R
D
L
K
-
T
G
-------------
K
T
N
RVKID
F
P
Q
Q
-
E
F
----------------
A
G
-----------
A
T
V
E
----
L
-
41
Fugue
53.87
25%
108
- C11 -
0.16
5MQP
-
?
A:
[24-623]
-----AGEIWISPQGN
D
L
N
------
D
G
T
R
P
S
P
-
K
A
T
L
---
T
S
-------------
A
L
R
-----
Q
A
R
E
--------
W
R
R
--
T
D
D
---------------------
E
R
------
V
R
-------
G
G
-
I
----------
T
---
I
-----
C
M
E
G
G
--------
T
--
Y
--
A
L
Y
E
---
P
-
V
--
F
I
R
P
E
D
-
S
G
-------------
T
E
D
-----
S
P
----------------------------------
T
V
I
R
----
P
V
7
HHSearch
45.75
29%
-68
- C11 -
3LPP
1
SUIS_HUMAN
D:
[574-628]
---------------------------------------------------------
A
-----
S
W
E
Q
--------
M
E
W
--
S
I
T
G
--------
M
------
L
-
E
--
F
S
------
L
F
-------
G
I
-
P
--------------
L
-----
V
G
A
D
I
---
C
G
-
F
-
V
--
A
--
E
T
T
E
---
E
-
L
--
C
R
R
W
M
Q
-
L
G
-------------
A
-----------------------------------------------------
44
Fugue
45.63
15%
-14
- C11 -
0.21
1S12
-
?
A:
[1-94]
----------------
M
I
K
------
V
T
V
T
N
S
F
-
F
E
V
T
---
G
H
-------------
A
P
D
-------
K
T
--------
L
C
A
--
S
V
S
L
--------
L
T
Q
H
---
V
-
A
--
N
F
------
L
K
-------
A
E
-
K
----------
K
---
A
-----
K
I
K
K
E
SGY
L
K
-
V
-
K
--
F
--
E
E
L
E
---
N
-
C
--
E
V
K
V
L
A
-
A
M
-------------
V
R
S
-----
L
K
E
L
-
E
Q
K
F
P
-------------
S
Q
-----------
I
R
V
E
VIDN
G
S
46
Fugue
45.57
19%
-55
- C11 -
0.25
2KON
-
?
A:
[1-82]
------------------
M
------
N
V
A
H
Y
R
G
-
Y
E
I
E
---
P
G
-----------------------
H
Q
--------
Y
R
D
--
D
I
R
K
--------
Y
V
P
Y
A
--
L
-
I
--
R
K
------
V
--------
G
V
-
P
----------
D
---
R
-----
T
P
I
P
T
---
T
Y
-
P
-
E
--
F
--
Y
D
L
E
---
A
-
D
--
A
E
R
V
S
I
-
A
C
-------------
A
K
I
-----
I
I
D
S
-
H
L
-
D
R
-------------
H
D
-----------
Q
G
L
A
----
D
L
18
HHSearch
45.34
31%
-49
- C11 -
5KZX
3
LYAG_HUMAN
A:
[541-599]
---------------------------------------------------------
S
-----
S
W
E
Q
--------
L
A
S
--
S
V
P
E
--------
I
------
L
-
Q
--
F
N
------
L
L
-------
G
V
-
P
--------------
L
-----
V
G
A
D
V
---
C
G
-
F
-
L
--
G
--
N
T
S
E
---
E
-
L
--
C
V
R
W
T
Q
-
L
G
-------------
A
-----------------------------------------------------
42
Fugue
45.00
22%
19
- C11 -
0.21
5CQQ
-
ZEST_DROME
A:
[4-82]
-------------LTP
R
F
T
------
A
E
E
K
E
V
L
-
Y
T
L
F
---
H
L
HEEVIDIKHRKYS
V
R
E
-----
T
W
D
K
--------
I
V
K
--
D
F
N
S
--------
H
P
H
V
S
--
A
-
M
--
R
N
------
I
K
-------
Q
I
-
Q
----------
K
---
F
-----
W
L
N
S
R
---
L
R
-
K
-
Q
--
Y
--
P
Y
--------------------------------------------------------------------------------------
6
HHSearch
44.36
29%
-64
- C11 -
0.18
3LPP
1
SUIS_HUMAN
A:
[574-621]
---------------------------------------------------------
A
-----
S
W
E
Q
--------
M
E
W
--
S
I
T
G
--------
M
------
L
-
E
--
F
S
------
L
F
-------
G
I
-
P
--------------
L
-----
V
G
A
D
I
---
C
G
-
F
-
V
--
A
--
E
T
T
E
---
E
-
L
--
C
R
R
W
M
Q
-
L
G
-------------
A
-----------------------------------------------------
15
HHSearch
43.75
23%
-62
- C11 -
3WEM
-
?
A:
[571-644]
---------------------------------------------------------
A
-----
R
W
D
D
--------
L
Q
Y
--
S
I
P
T
------------
M
--
L
-
N
--
F
G
------
L
F
-------
G
M
-
P
--------------
M
-----
I
G
A
D
I
---
C
G
-
F
-
A
--
E
--
S
T
T
E
---
E
-
L
--
C
R
R
W
I
Q
-
L
G
-------------
A
-----------------------------------------------------
39
Fugue
43.44
13%
22
- C11 -
1B24
-
DMO1_DESMO
A:
[7-99]
------------------
V
------
S
G
I
S
A
Y
L
-
L
G
L
I
---
I
G
-------------
D
G
G
-----
L
Y
K
L
KYKGNRSE
Y
R
V
--
V
I
T
Q
--------
K
S
E
N
L
--
I
-
K
--
Q
H
------
I
A
-------
P
L
M
Q
----------
F
---
L
-----
I
D
E
L
N
---
V
K
-
S
-
K
--
I
--
Q
I
V
K
GDT
R
-
Y
--
E
L
R
V
S
S
-
K
K
-------------
L
Y
Y
-----
Y
F
A
N
M
L
E
-
R
I
-------------
R
----------------------
20
HHSearch
43.32
29%
-47
- C11 -
3L4Y
3
MGA_HUMAN
A:
[545-593]
---------------------------------------------------------
A
-----
T
W
D
D
--------
L
R
W
--
S
I
P
G
------------
V
--
L
-
E
--
F
N
------
L
F
-------
G
I
-
P
--------------
M
-----
V
G
P
D
I
---
C
G
-
F
-
A
--
L
--
D
T
P
E
---
E
-
L
--
C
R
R
W
M
Q
-
L
G
-------------
A
-----------------------------------------------------
16
HHSearch
43.16
23%
-64
- C11 -
3WEO
-
?
A:
[571-644]
---------------------------------------------------------
A
-----
R
W
D
D
--------
L
Q
Y
--
S
I
P
T
------------
M
--
L
-
N
--
F
G
------
L
F
-------
G
M
-
P
--------------
M
-----
I
G
A
D
I
---
C
G
-
F
-
A
--
E
--
S
T
T
E
---
E
-
L
--
C
R
R
W
I
Q
-
L
G
-------------
A
-----------------------------------------------------
17
HHSearch
41.55
23%
-43
- C11 -
0.12
5F0E
1
GANAB_MOUSE
A:
[534-581]
---------------------------------------------------------
A
-----
E
W
D
H
--------
L
K
I
--
S
I
P
------------
M
C
--
L
-
S
--
L
A
------
L
V
-------
G
L
-
S
--------------
F
-----
C
G
A
D
V
---
G
G
-
F
-
F
--
K
--
N
P
E
P
---
E
-
L
--
L
V
R
W
Y
Q
-
M
G
-------------
A
-----------------------------------------------------
28
SP3
40.80
15%
-20
- C11 -
0.26
1MWW
-
Y138A_HAEIN
A:
[1-120]
-------------------------------
M
-
I
T
V
F
---
G
L
-------------
K
S
K
------
L
A
P
--------
R
R
E
--
K
L
A
E
--------
V
I
Y
N
S
--
L
-
H
--
L
G
------
L
--------
D
I
-
P
----------
K
GKH
A
IRFLC
L
E
K
E
D
---
F
Y
-
Y
-
P
--
F
--
D
R
S
D
---
D
Y
T
--
V
I
E
I
N
L
M
A
G
RMEGTKKRLIKML
F
S
E
-----
L
E
Y
K
-
L
G
-
I
R
AHDVEITIKEQPA
H
C
-----------
W
G
F
R
----
G
M
35
Fugue
39.77
10%
-66
- C11 -
0.17
2BL8
-
?
A:
[4-103]
----------------
N
A
K
------
Q
I
V
H
E
L
Y
-
N
D
I
S
---
I
S
-------------
K
D
P
-----
K
Y
S
D
--------
I
L
E
--
V
L
Q
K
--------
V
Y
L
K
L
--
E
P
S
--
P
L
------
I
N
-------
R
L
-
V
----------
N
---
Y
-----
L
Y
F
T
A
---
Y
T
-
N
-
K
IR
F
--
T
E
Y
Q
---
E
-
E
--
L
I
R
N
L
S
-
E
I
-------------
G
R
T
-----
A
G
I
N
-
G
L
-
Y
R
-------------
A
D
-----------
Y
G
D
K
----
S
Q
24
SP3
39.64
12%
149
- C13 -
-
1UEL
-
RD23B_HUMAN
A:
[1-95]
-----------MQVTL
K
T
L
------
Q
Q
Q
---
T
-
F
K
I
D
---
I
D
-------------
P
E
E
-----
T
V
K
A
--------
L
K
E
--
K
I
E
S
--------
E
K
G
K
D
--
A
-
F
PV
A
G
------
Q
K
LIYA---
G
K
-
I
---------------------
L
N
D
D
---
T
A
L
K
-
E
--
Y
--
K
I
D
E
---
K
-
N
--
F
V
V
V
M
V
-
T
K
-------------
P
K
A
-----
V
S
T
P
-----
A
-------------
P
A
-----------
T
L
E
H
----
H
H