@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_103400T0_kcl82: (2019-03-28 )
ISSPESLSDEEFEKFCCVYIVNLGKPDQREWPVLTGKEVWFEHKRKKYDVMAFDSCNLVWGRRGEPKGVTF
Atome Classification :
(20 SA)
--------------------------...-......10..----..---------....--20.....--.-..30...---..------------.--------.-----.40........50..-..----------.....60-..--..--....70
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------ISS-PESL
S
D
E
E
F
E
----
K
F
---------
C
C
V
Y
--
I
V
NLGKP--D-QREWPVL---T
G
------------
K
--------
E
-----
V
W
F
E
H
KRKKY
D
V
-
M
A
-FD----------SCN
L
V
WG-RR--GE--PKGVTF
13
Fugue
70.06
21%
10
- C9 -
-
2MYW
-
?
A:
[7-85]
---------------------------
S
G
-
R
E
N
L
Y
F
Q
G
H
M
AAPA
R
F
---------
C
V
Y
Y
--
D
G
H
L
P
A
T
--
R
-
V
L
L
M
Y
V
R
---
I
G
------------
T
--------
T
-----
A
T
I
T
A
R
G
H
E
F
E
V
-
E
A
-
K
D
----------
Q
N
C
K
V
I
L
-
T
N
--
G
K
QA
P
D
W
L
A
A
52
SP3
66.19
18%
42
- C8 -
0.35
1U2F
-
A:
[1-90]
---------------------ARRLY
V
G
N
I
P
F
G
I
T
E
E
A
M
M
----
D
F
---------
F
N
A
Q
--
M
R
L
G
G
L
T
--
Q
-
A
P
G
N
P
V
L
AVQ
I
N
------------
Q
--------
D
KNFAF
L
E
F
R
S
V
D
E
T
T
Q
A
-
M
A
-
F
D
----------
G
I
I
F
-----
Q
--
G
Q
--
S
L
K
I
R
R
2
PsiBlast_PDB
64.13
32%
98
- C8 -
0.23
6BQ3
1
?
A:
[134-188]
-----------------------------------
D
E
E
V
V
----
E
F
---------
C
K
S
Y
--
L
V
V
N
K
E
A
FH
D
-
S
R
L
E
V
V
I
---
N
D
------------
A
--------
K
-----
A
E
L
E
G
K
E
E
K
Y
D
V
-
I
V
-
G
D
----------
L
A
D
P
I
E
G
---------------
18
Fugue
63.67
22%
1
* C9 *
-
1XAU
-
BTLA_MOUSE
A:
[12-115]
------------------CEVQLNIK
R
N
S
-
K
H
S
A
W
T
G
E
L
F
----
K
I
---------
E
C
P
V
--
K
Y
C
V
H
R
P
--
N
--
V
T
W
C
K
H
---
N
G
TIWVPLEVGPQL
Y
--------
T
-----
S
W
E
E
N
R
S
V
P
V
F
V
-
L
H
-
F
K
PIHLSDNGSY
S
C
S
T
N
F
N
S
Q
V
--
I
N
--
S
H
S
V
T
I
14
Fugue
63.63
26%
-59
- C8 -
0.21
1JEI
-
EMD_HUMAN
A:
[1-53]
---------------------------
D
N
-
Y
A
D
L
S
D
T
E
L
T
----
T
L
---------
L
R
R
Y
--
N
I
P
H
G
----------
P
V
V
---
G
S
------------
T
--------
R
-----
R
L
Y
E
K
K
I
F
E
Y
E
T
-
Q
--------------------
R
-
R
R
--
L
S
--
P
P
S
S
S
-
6
PsiBlast_PDB
63.02
32%
100
- C8 -
0.25
6BQ7
1
?
A:
[134-188]
-----------------------------------
D
E
E
V
V
----
E
F
---------
C
K
S
Y
--
L
V
V
N
K
E
A
FH
D
-
S
R
L
E
V
V
I
---
N
D
------------
A
--------
K
-----
A
E
L
E
G
K
E
E
K
Y
D
V
-
I
V
-
G
D
----------
L
A
D
P
I
E
G
---------------
5
PsiBlast_PDB
62.63
32%
98
- C8 -
0.33
6BQ6
1
?
A:
[134-188]
-----------------------------------
D
E
E
V
V
----
E
F
---------
C
K
S
Y
--
L
V
V
N
K
E
A
FH
D
-
S
R
L
E
V
V
I
---
N
D
------------
A
--------
K
-----
A
E
L
E
G
K
E
E
K
Y
D
V
-
I
V
-
G
D
----------
L
A
D
P
I
E
G
---------------
15
Fugue
62.34
20%
45
- C8 -
0.41
2DA7
-
A:
[1-71]
---------------------GSSGS
S
G
S
-
P
I
N
P
Y
K
D
H
M
S
----
V
L
---------
K
A
Y
Y
--
A
M
N
M
-
E
P
--
N
-
S
D
E
L
L
K
I
---
S
I
------------
A
VGLPQEFV
K
-----
E
W
F
E
Q
R
K
V
Y
Q
Y
S
-
N
S
---------------------
R
S
--
G
P
--
S
S
G
---
4
PsiBlast_PDB
61.89
32%
106
- C8 -
0.18
6BQ5
2
?
A:
[134-188]
-----------------------------------
D
E
E
V
V
----
E
F
---------
C
K
S
Y
--
L
V
V
N
K
E
A
FH
D
-
S
R
L
E
V
V
I
---
N
D
------------
A
--------
K
-----
A
E
L
E
G
K
E
E
K
Y
D
V
-
I
V
-
G
D
----------
L
A
D
P
I
E
G
---------------
3
PsiBlast_PDB
61.65
32%
100
- C8 -
0.28
6BQ4
3
?
A:
[134-188]
-----------------------------------
D
E
E
V
V
----
E
F
---------
C
K
S
Y
--
L
V
V
N
K
E
A
FH
D
-
S
R
L
E
V
V
I
---
N
D
------------
A
--------
K
-----
A
E
L
E
G
K
E
E
K
Y
D
V
-
I
V
-
G
D
----------
L
A
D
P
I
E
G
---------------
17
Fugue
61.28
25%
-87
- C9 -
-
2JDQ
-
PB2_I75A3
D:
[688-756]
-----------------------------------
S
A
V
L
R
----
G
F
---------
L
I
L
-------
G
K
E
--
D
-
R
R
Y
G
P
A
L
---
S
I
------------
N
--------
E
-----
L
S
N
L
A
K
G
E
K
A
N
V
-
L
I
G
Q
G
----------
D
V
V
L
V
M
K
-
R
K
--
R
D
--
S
Q
T
A
T
K
50
SP3
59.15
19%
-59
* C8 *
0.21
1JEI
-
EMD_HUMAN
A:
[1-53]
---------------------------
D
N
-
Y
A
D
L
S
D
T
E
L
T
----
T
L
---------
L
R
R
Y
--
N
I
P
H
G
----------
P
V
V
---
G
S
------------
T
--------
R
-----
R
L
Y
E
K
K
I
F
E
Y
E
T
-
Q
--------------------
R
-
R
R
--
L
S
--
P
P
S
S
S
-
21
Fugue
58.30
18%
-182
- C8 -
0.27
2KJF
-
CCLA_CARML
A:
[1-60]
---------------------------
L
V
-
A
Y
G
I
A
Q
G
T
A
E
----
K
V
-----------
V
S
--
L
I
N
A
G
L
T
--
V
-
G
S
I
I
S
I
L
---
G
G
------------
V
--------
T
-----
V
G
L
--------
S
-
G
V
-
F
T
----------
A
V
K
A
A
I
A
-
K
Q
--
G
I
--
K
K
A
I
Q
L
58
SP3
57.65
14%
82
- C8 -
0.32
1CVJ
2
PABP1_HUMAN
A:
[11-90]
----------------------ASLY
V
G
D
L
H
P
D
V
T
E
A
M
L
Y
----
E
K
---------
F
S
P
A
GP
I
L
S
I
R
V
C
--
R
-
D
M
I
-------
T
R
------------
R
--------
S
LGYAY
V
N
F
Q
Q
P
A
---
D
A
E
R
A
-
L
D
----------
T
M
N
---
F
-
D
V
IK
G
K
--
P
V
R
I
M
W
22
Fugue
55.51
18%
100
- C9 -
-
5A6W
4
?
C:
[11-93]
----------------------------
R
-
A
I
D
L
S
R
E
R
D
P
----
N
F
FDHPGIPVP
E
C
F
W
--
F
M
F
K
N
N
V
--
R
-
Q
D
A
G
T
C
Y
---
S
S
------------
W
--------
K
-----
M
D
M
K
V
G
P
N
W
V
H
I
-
K
S
-
D
D
----------
N
C
N
L
S
----
G
--
D
F
--
P
P
G
W
I
V
7
PsiBlast_PDB
55.03
34%
-50
- C15 -
-
1S8G
2
PA2H1_AGKCL
A:
[6-40]
-----------------------------------------------------------------------------------
G
------------
K
--------
M
-----
I
L
Q
E
T
G
K
N
A
I
T
S
-
Y
G
-
S
Y
----------
G
C
N
C
G
W
G
-
H
R
--
G
Q
--
P
K
D
A
T
-
20
Fugue
54.53
19%
51
- C8 -
0.38
5L2X
1
PRIPO_HUMAN
A:
[1-348]
MNRKWEAKLKQIEERASPEEPPSIWR
L
F
H
-
R
Q
A
Q
A
F
N
F
V
K
----
S
C
KED------
V
H
V
F
--
A
L
E
C
K
V
G
--
D
G
Q
R
I
Y
L
V
T
---
T
Y
------------
A
--------
E
-----
F
W
F
Y
Y
K
S
R
K
N
L
L
-
H
C
-
Y
E
----------
V
I
--------------
P
E
N
A
V
C
8
PsiBlast_PDB
54.38
34%
-41
- C15 -
-
1S8H
-
PA2H1_AGKCL
A:
[6-40]
-----------------------------------------------------------------------------------
G
------------
K
--------
M
-----
I
L
Q
E
T
G
K
N
A
I
T
S
-
Y
G
-
S
Y
----------
G
C
N
C
G
W
G
-
H
R
--
G
Q
--
P
K
D
A
T
-
1
PsiBlast_PDB
54.06
38%
-46
* C15 *
-
2QOG
-
PA2BC_CRODU
B:
[7-40]
------------------------------------------------------------------------------------------------
K
--------
M
-----
I
K
F
E
T
R
K
N
A
I
P
F
-
Y
A
-
F
Y
----------
G
C
Y
C
G
W
G
-
G
R
--
G
R
--
P
K
D
A
T
-
10
PsiBlast_PDB
54.04
35%
-64
- C15 -
-
3R0L
-
PA2BB_CRODU
D:
[7-40]
------------------------------------------------------------------------------------------------
K
--------
M
-----
I
K
F
E
T
R
K
N
A
V
P
F
-
Y
A
-
F
Y
----------
G
C
Y
C
G
W
G
-
G
Q
--
G
R
--
P
K
D
A
T
-