@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_104820T0_kcl98: (2019-03-28 )
FDCYIERLQKEHMLSGMKAEPNKEAWIDGFEIWVYSNCRIHPTILPDGSIANGRF
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..--.......10------.------...---....20-----.......-.30....-------------...------.40.--------...---..-..----50-.....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F
D
--
C
Y
I
E
R
L
Q
K
E
------
H
------
M
LS---GMKAEP-----N
K
E
A
WI
D
-
G
F
E
I
W
V
Y
-------------SN
C
------
R
I
H
P
--------
T
IL---PD-GS----I--ANGRF
4
HHSearch
77.55
33%
-118
- C6 -
-
5ZNG
-
?
C:
[5-58]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
C
I
I
Q
R
Y
K
D
G
------
D
------
V
N
N
---
I
Y
T
A
N
R
-----
N
E
E
I
T
I
E
-
E
Y
K
V
F
V
N
-------------
E
A
C
------
H
P
Y
P
--------
V
I
L
---
P
D
-
R
S
----
V
--
L
S
G
D
F
1
PsiBlast_PDB
77.55
33%
-118
- C6 -
-
5ZNG
-
?
C:
[5-58]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
C
I
I
Q
R
Y
K
D
G
------
D
------
V
N
N
---
I
Y
T
A
N
R
-----
N
E
E
I
T
I
E
-
E
Y
K
V
F
V
N
-------------
E
A
C
------
H
P
Y
P
--------
V
I
L
---
P
D
-
R
S
----
V
--
L
S
G
D
F
5
HHSearch
74.01
33%
-100
- C6 -
-
2MYV
-
?
A:
[25-78]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
C
I
I
Q
R
Y
K
D
G
------
D
------
V
N
N
---
I
Y
T
A
N
R
-----
N
E
E
I
T
I
E
-
E
Y
K
V
F
V
N
-------------
E
A
C
------
H
P
Y
P
--------
V
I
L
---
P
D
-
R
S
----
V
--
L
S
G
D
F
2
PsiBlast_PDB
74.01
33%
-100
- C6 -
-
2MYV
-
?
A:
[25-78]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
C
I
I
Q
R
Y
K
D
G
------
D
------
V
N
N
---
I
Y
T
A
N
R
-----
N
E
E
I
T
I
E
-
E
Y
K
V
F
V
N
-------------
E
A
C
------
H
P
Y
P
--------
V
I
L
---
P
D
-
R
S
----
V
--
L
S
G
D
F
49
SP3
63.51
18%
-59
- C8 -
-
1HK9
-
HFQ_ECOLI
A:
[6-69]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SL
Q
D
--
P
F
L
N
A
L
R
R
E
RVPVSI
Y
------
L
V
N
---
G
I
K
L
-
Q
-----
G
Q
I
E
S
F
D
-
Q
F
V
I
L
L
K
-------------
N
T
V
SQMVYK
H
A
I
S
--------
T
V
V
---
P
S
-
R
P
----
V
--
S
----
45
Fugue
62.08
20%
-48
- C9 -
0.23
4V0B
-
FTSH_ECOLI
A:
[8-70]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
K
V
D
Y
S
------
T
------
F
L
Q
---
E
V
N
N
D
Q
-----
V
R
E
A
R
I
N
-
G
R
E
I
N
V
T
KKDSNRYTTYIPV
Q
D
P
------
K
L
L
D
--------
N
L
L
---
T
K
-
N
V
----
K
--
V
V
G
E
P
48
SP3
61.04
21%
68
- C8 -
-
1EEJ
-
DSBC_ECOLI
A:
[1-60]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
DA
A
I
Q
Q
T
L
A
K
----------------
M
---
G
I
K
S
S
D
-----
I
Q
P
A
P
V
A
-
G
M
K
T
V
L
T
-------------
N
S
G
------
V
L
Y
I
--------
T
-----
D
D
-
G
K
H---
I
--
I
Q
G
P
M
36
Fugue
52.57
23%
-179
- C- -
-
1G39
-
HNF1A_MOUSE
D:
[2-31]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--
S
K
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-
A
L
G
-------------------------------------------------------------
31
Fugue
52.27
25%
-147
- C9 -
0.17
1F93
-
HNF1A_MOUSE
F:
[5-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-
A
L
G
-------------------------------------------------------------
37
Fugue
51.95
23%
-176
- C- -
-
1G39
-
HNF1A_MOUSE
B:
[2-31]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--
S
K
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-
A
L
G
-------------------------------------------------------------
30
Fugue
51.73
30%
19
- C9 -
0.12
2EYQ
3
MFD_ECOLI
A:
[5-1150]
PEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIG
F
S
--
L
Y
M
E
L
L
E
N
A
------
V
------
D
A
L
---
K
A
G
R
E
P
-----
S
L
E
D
L
T
S
Q
Q
T
E
V
E
L
R
-------------
M
-----------
P
--------
S
L
L
---
P
D
-
D
F
----
I
PD
V
N
T
R
L
54
SP3
51.66
18%
30
- C9 -
0.35
1LUJ
-
CNBP1_HUMAN
B:
[5-75]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPAKSP
E
E
--
M
Y
I
Q
Q
K
V
R
V
------
L
------
L
M
L
RKM
G
S
N
L
T
A
-----
S
E
E
E
F
L
R
-
T
Y
A
G
V
V
S
-------------
S
Q
L
------
S
Q
L
P
--------
Q
H
S
---
I
D
Q
A
A
EDVV
M
--
A
F
S
R
S
32
Fugue
51.56
26%
-150
- C9 -
0.22
1F93
-
HNF1A_MOUSE
H:
[5-30]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-
A
L
--------------------------------------------------------------
55
SP3
51.55
12%
-63
* C9 *
1KCF
-
CCE1_SCHPO
A:
[3-52]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
--
V
K
L
S
F
L
Q
H
I
------
C
------
K
L
T
---
G
L
S
R
S
G
-----
R
K
D
E
L
L
R
-
R
I
V
------------------
D
S
------
P
I
Y
P
-------------------------------
50
SP3
50.26
21%
29
- C9 -
0.28
1JYR
-
GRB2_HUMAN
A:
[1-96]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMAW
F
F
--
G
K
I
P
R
A
K
A
E
------
E
------
M
L
S
---
K
Q
R
H
D
G
AFLIR
E
S
E
S
A
P
G
-
D
F
S
L
S
V
K
-------------
F
G
N
------
D
V
Q
H
--------
F
K
V
LRD
G
A
-
G
K
YF--
L
--
W
V
V
K
F
39
Fugue
50.15
22%
-110
- C9 -
0.17
1F93
-
HNF1A_MOUSE
E:
[1-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
--
S
K
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-
A
L
G
-------------------------------------------------------------
12
HHSearch
49.20
22%
-
- C- -
-
4PS6
-
IVY_PSEAE
A:
[62-106]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
S
S
P
-----
S
T
S
L
S
L
E
-
G
Q
P
Y
V
L
A
-------------
N
S
C
------
K
P
H
D
CGNNRLLV
A
F
R
---
G
D
-
K
S
----
A
--
A
Y
G
--
41
Fugue
48.78
25%
-150
- C- -
-
1G39
-
HNF1A_MOUSE
A:
[1-28]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
--
S
K
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-----------------------------------------------------------------
53
SP3
48.17
12%
-49
* C8 *
-
1KQ1
2
?
A:
[6-65]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NI
Q
D
--
K
A
L
E
N
F
K
A
N
------
Q
TEVTVF
F
L
N
---
G
F
Q
M
-
K
-----
G
V
I
E
E
Y
D
-
K
Y
V
V
S
L
N
-------------
S
Q
--------
G
K
Q
--------
H
L
I
---
Y
K
-
H
A
----
I
--
S
T
Y
T
V
35
Fugue
48.16
25%
-116
- C9 -
0.24
1F93
-
HNF1A_MOUSE
G:
[4-30]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
L
S
Q
L
Q
T
E
------
L
------
L
A
A
---
L
L
E
S
G
L
-----
S
K
E
A
L
I
Q
-
A
L
--------------------------------------------------------------