@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Bm88324_115680T0_kcl90: (2019-03-29 )
HGGQTFHNELRCIAEFYEHGDISNYFCHPKSDVKPGGVIKCVYRDHPIVVKTDPGCNWKSTAG
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------....----.....10.......----------.20-------.......-..30-.--.....-------.-----..40......--.--.50......---..60..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------HGG
Q
----
T
F
H
N
E
L
R
C
I
A
E
F
Y
E----------HG--------DISN
Y
F
C-HPK--S--DVKPG-------
G
-----
V
I
K
C
V
YRDH
P
--
I
--
V
V
KTDPGCN---WKSTAG
15
SP3
69.21
14%
-39
- C5 -
-
1LVA
-
A:
[135-198]
--------------------------------------------------------------------------------------------------
F
S
E
----
T
Q
K
K
L
L
K
D
L
E
D
K
Y
R
----------
V
S
RWQPPSFK
E
V
A
G
S
F
N
-
L
D
P
--
S
--
E
L
E
E
--------------
L
L
H
Y
L
V
R
E
G
---
V
--
L
V
K
I
N
D
E
F
Y
---
W
H
R
---
11
PsiBlast_PDB
59.46
34%
-110
- C4 -
5H3T
-
GEMI5_HUMAN
A:
[13-112]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
9
PsiBlast_PDB
58.82
34%
-99
- C4 -
5H1M
-
GEMI5_HUMAN
A:
[21-97]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
23
SP3
58.67
19%
49
- C5 -
-
1FX7
-
IDER_MYCTU
A:
[1-64]
-----------------------------------------------------------------------------------------------MN
E
L
V
D
----
T
T
E
M
Y
L
R
T
I
Y
D
L
E
E
----------
E
G
VTPLRA--
R
I
A
E
R
L
D
-
Q
S
G
--
P
--
T
V
S
---------
Q
-----
T
V
S
R
M
E
R
D
G
L
--
L
--
R
V
A
G
D
R
H
L
E
---
L
-----
12
PsiBlast_PDB
58.64
34%
-82
- C4 -
5H3U
-
GEMI5_HUMAN
A:
[13-94]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
6
PsiBlast_PDB
58.28
34%
-97
- C4 -
5H1J
-
GEMI5_HUMAN
A:
[21-78]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
22
SP3
57.87
20%
42
- C5 -
-
1EMV
-
IMM9_ECOLX
A:
[3-85]
------------------------------------------------------------------------LKHSISDYTEAEFLQLVTTICNADT
S
S
E
E
----
E
L
V
K
L
V
T
H
F
E
E
M
T
E
----------
H
P
--------
S
G
S
D
L
I
Y
-
Y
P
K
--
E
GD
D
D
S
P
S
-------
G
-----
I
V
N
------------
T
V
K
-----
Q
---
W
R
A
A
N
G
1
PsiBlast_PDB
57.85
34%
-96
* C4 *
5TEE
2
GEMI5_HUMAN
A:
[32-93]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
8
PsiBlast_PDB
57.73
34%
-100
- C4 -
5H1L
1
GEMI5_HUMAN
A:
[21-89]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
7
PsiBlast_PDB
56.97
34%
-79
- C4 -
5H1K
-
GEMI5_HUMAN
A:
[21-98]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
3
PsiBlast_PDB
56.83
34%
-98
- C4 -
5THA
-
GEMI5_HUMAN
A:
[32-101]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
10
PsiBlast_PDB
56.82
34%
-91
- C4 -
5H3S
-
GEMI5_HUMAN
A:
[13-109]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
5
PsiBlast_PDB
56.76
34%
-103
- C4 -
5GXI
-
GEMI5_HUMAN
A:
[31-115]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
2
PsiBlast_PDB
56.47
34%
-85
- C4 -
5TEF
2
GEMI5_HUMAN
A:
[32-103]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
4
PsiBlast_PDB
55.94
34%
-91
- C4 -
5GXH
1
GEMI5_HUMAN
A:
[31-110]
----------------------------------------------------------------------------------------------------------------------------------------------
N
W
Y
C
-
A
R
C
--
S
--
D
A
V
P
G
-------
G
-----
L
F
G
F
A
A
R
T
S
V
--
F
--
L
V
R
V
G
P
G
-----------
49
Fugue
52.97
16%
-59
- C5 -
-
5J6X
-
?
A:
[7-72]
--------------------------------------------------------------------------------------------------
M
S
A
----
E
N
E
I
E
M
R
I
C
D
Y
L
R
R
----------
H
G
--------
R
S
T
V
Q
D
I
-
F
K
E
--
L
--
K
L
E
K
S
-------
T
-----
V
N
R
H
L
Y
S
L
Q
A
SK
Q
--
V
F
K
T
V
E
D
N
K
RPV
W
D
L
V
E
-
18
SP3
52.70
17%
41
- C5 -
-
1HLV
-
CENPB_HUMAN
A:
[1-66]
-------------------------------------------------------------------------------------------------
M
G
P
K
RRQL
T
F
R
E
K
S
R
I
I
Q
E
V
E
E
----------
N
P
--------
D
L
R
K
G
E
I
-
A
R
R
--
F
--
N
I
P
P
S
-------------
T
L
S
T
I
L
K
N
K
R
--
A
--
I
L
A
S
E
R
K
Y
G
---
V
A
S
T
C
R
52
Fugue
50.92
10%
-18
- C5 -
-
1A0P
-
?
?:
[3-112]
----------------------------------------------------------------------------QDLARIEQFLDALWLEKNLAE
N
T
L
N
----
A
Y
R
R
D
L
S
M
M
V
E
W
L
H
HRGLTLATAQ
S
D
--------
D
L
Q
A
L
L
A
-
E
R
L
--
S
--
S
A
R
L
L
-------
S
-----
A
V
R
R
L
F
Q
Y
L
Y
--
R
EK
F
R
E
D
D
P
S
A
H
---
L
-----
16
SP3
48.84
15%
61
* C7 *
-
1PKL
-
KPYK_LEIME
A:
[89-194]
-----------------------------------------------------------------------------------EIRTGQFVGGDAVM
E
R
G
A
----
T
C
--
Y
V
T
T
D
P
A
F
A
D
----------
K
G
--------
T
K
D
K
F
Y
I
D
Y
Q
N
LS
K
--
V
V
R
P
G
NYIYIDD
G
ILILQ
V
Q
S
H
E
-
D
E
Q
T
--
L
--
E
C
T
V
T
N
S
H
T
---
I
S
D
R
R
G
51
Fugue
48.36
26%
20
- C2 -
-
4BIN
-
AMIC_ECOLI
A:
[16-394]
FQGHMQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLF
A
L
A
P
----
V
A
G
F
K
E
R
L
V
M
D
L
Y
P
-----------
A
--------
P
L
L
A
L
L
E
-
D
Y
N
--
S
--
G
P
Q
P
G
-------
K
-----
A
----
G
R
D
R
P
--
I
--
V
I
M
L
D
P
G
H
---------
G