@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CH0043_116130T0_kcl53: (2019-03-29 )
GDCFMGLYEAGGRNPNHIIGQETPDDSGIFELRRENGSVIQVKVKKCQLVAYWGWVPLGQELR
Atome Classification :
(20 SA)
----------------------------------------------------------.........10-.........20--........-----------.30......-...40...----.-.-...50..--.-.....--60..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------GD
C
F
M
G
L
Y
E
A--GGRNPNHIIG---QETPDDS
G
-----------
I
F
-
E
L
RREN-G
S
V
I
Q
V
K
V
----
K
-
K
-
C
Q
L
V
A
Y
W--G-WVPLG--QELR
6
PsiBlast_PDB
76.63
33%
-61
- C8 -
0.37
1XUB
-
PHZF_PSEFL
A:
[104-150]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
A
A
S
M
----
D
-
Q
-----
P
I
P
--
T
-
W
T
A
L
G
--
R
D
--
2
PsiBlast_PDB
76.10
33%
-67
- C8 -
0.33
1T6K
-
PHZF_PSEFL
A:
[84-130]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
A
A
S
M
----
D
-
Q
-----
P
I
P
--
T
-
W
T
A
L
G
--
R
D
--
5
PsiBlast_PDB
75.40
33%
-68
- C8 -
0.39
1XUA
-
PHZF_PSEFL
A:
[104-150]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
A
A
S
M
----
D
-
Q
-----
P
I
P
--
T
-
W
T
A
L
G
--
R
D
--
3
PsiBlast_PDB
74.95
33%
-55
- C8 -
0.35
1U1W
-
PHZF_PSEFL
A:
[104-150]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
A
A
S
M
----
D
-
Q
-----
P
I
P
--
T
-
W
T
A
L
G
--
R
D
--
4
PsiBlast_PDB
74.93
33%
-54
- C8 -
0.27
1U1X
-
PHZF_PSEFL
A:
[104-150]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
A
A
S
M
----
D
-
Q
-----
P
I
P
--
T
-
W
T
A
L
G
--
R
D
--
7
PsiBlast_PDB
74.38
33%
-54
- C8 -
0.33
5IWE
5
PHZF_PSEFL
A:
[104-150]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
A
A
S
M
----
D
-
Q
-----
P
I
P
--
T
-
W
T
A
L
G
--
R
D
--
45
SP3
65.21
20%
-22
- C- -
-
1IGQ
-
KORB2_ECOLX
A:
[305-358]
-----------------------------------------------------------
K
K
A
I
V
Q
V
E
H
--
D
E
R
-
P
A
R
L
I
L
---
N
R
R
P
P
A
E
G
-----------
Y
A
-
W
L
K
Y
E
D
D
G
Q
E
F
E
A
N
L
----
A
-
D
-
V
K
L
V
A
L
I
E-
G
------------
1
PsiBlast_PDB
60.97
46%
-73
- C8 -
0.24
1U1V
-
PHZF_PSEFL
A:
[104-133]
----------------------------------------------------------------------
G
A
H
T
D
N
H
R
L
Y
---
L
E
T
Q
M
G
T
I
-----------
A
F
-
E
L
E
R
Q
N
-
G
S
V
I
----------------------------------
39
Fugue
60.63
28%
12
- C5 -
-
1AER
1
TOXA_PSEAE
A:
[1-211]
AFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVR
A
A
I
W
R
G
F
Y
I
A
--
G
--
D
P
A
L
A
Y
G
YAQ
D
Q
E
P
D
A
R
G
----------------
R
I
R
N
-
G
A
L
L
R
V
Y
V
----
P
-
R
-
S
S
L
P
G
F
Y
RT
S
-
L
T
L
A
A
--
P
E
A
A
54
SP3
56.07
15%
32
- C6 -
-
1OQK
-
RNP1_METTH
A:
[9-86]
----------------------------------------------------------------
R
H
E
L
--
I
G
L
S
V
-
R
I
A
R
---
S
V
H
R
D
I
Q
G
ISGRVVDETRN
T
L
-
R
I
E
M
D
D
-
G
R
E
I
T
V
P
K
----
G
-
I
-
A
V
F
H
F
R
------
T
P
Q
G
--
E
L
V
E
47
SP3
53.11
22%
-126
- C6 -
-
1D09
-
PYRI_ECOLI
B:
[101-153]
-----------------------------------------------------------
E
R
I
D
N
V
L
V
C
--
P
--
N
S
N
C
I
S
H
---
A
E
-
P
V
S
S
------------
S
F
-
A
V
R
K
R
A
-
N
D
-
I
A
L
K
C
----
K
-
Y
-
C
E
K
E
F
S
H
--
N
-
V
V
-
L
A
--
N
---
27
HHSearch
52.33
32%
2
- C8 -
0.25
2MHG
-
?
B:
[108-145]
-----------------------------------------------------------------------
S
G
E
P
D
V
T
I
-----
R
Q
E
G
D
K
T
-----------
I
Q
-
E
Y
R
-
V
N
-
G
F
L
Y
A
I
K
V
----
V
P
K
-
H
-
G
K
P
Y
----------------
41
Fugue
51.98
22%
-75
* C7 *
-
3ZO6
-
ATPL_BACPE
C:
[2-69]
------------------------------------------------------AFLG
A
A
I
A
A
G
L
A
A
V
--
G
G
A
I
G
V
A
I
I
V
---
K
A
T
I
E
G
T
T
-----------
R
Q
P
E
L
R
G
T
L
-
Q
T
L
M
F
I
G
V
----
P
-
L
-
A
E
A
V
P
I
I
--
A
-
I
V
I
S
L
--
L
I
L
F
46
SP3
51.84
20%
40
- C6 -
-
1E2W
-
CYF_CHLRE
A:
[169-232]
---------------------------------------------------------------
T
I
Y
N
A
SA
A
G
K
-
I
V
A
I
T
A
---
L
S
E
K
K
G
G
F
-----------
E
V
-
S
I
E
K
A
N
-
G
E
V
V
V
D
K
I
----
P
-
A
G
P
D
L
I
V
K
E
--
G
Q
T
V
Q
A
D
--
Q
P
L
T
20
HHSearch
50.78
44%
-86
* C12 *
-
6B12
-
?
B:
[5-31]
-------------------------------------------------------------------------------------------------------
F
-
E
R
I
R
E
D
-
G
K
V
I
D
E
N
M
----
T
-
V
-
D
Q
M
I
A
-
L
--
G
-
W
S
P
--------
49
SP3
49.16
12%
32
- C6 -
-
1NEB
-
?
?:
[1-60]
--------------------------------------------------------TA
G
K
I
F
R
A
M
Y
D
Y
--
M
A
A
D
A
D
E
V
-----
S
F
K
D
G
D
A
------------
I
I
-
N
V
Q
A
I
D
-
E
G
W
M
Y
G
T
V
----
Q
-
R
-
T
G
R
---
T
--
G
-
M
L
P
A
N
YV
E
A
I
-
40
Fugue
48.54
25%
35
* C10 *
-
4YMP
2
?
A:
[12-130]
---------------VFDAVIKAYKDNSDEESYATVYIKDPKLTIENGKRIITATLKD
S
D
F
F
D
Y
L
K
V
-------
E
F
H
D
V
K
---
V
L
S
E
D
K
------------------
R
K
H
G
-
T
K
V
I
Q
F
E
V
GELG
K
-
R
-
Y
N
M
Q
M
H
I
--
L
-
I
P
T
L
G
--
Y
D
K
E
24
HHSearch
45.23
29%
-235
* C11 *
-
1YD6
-
UVRC_GEOKA
D:
[11-31]
------------------------------------------------------------------------------------
V
L
P
E
Q
P
G
-----------
C
Y
-
L
M
K
D
K
H
-
G
T
V
I
Y
V
--------------------------------
8
HHSearch
44.99
26%
-41
* C9 *
-
1XIW
-
CD3D_HUMAN
B:
[34-73]
-------------------------------------------------------------------------
I
T
R
L
D
L
G
---
K
R
I
L
D
P
R
G
-----------
I
Y
-
R
C
N
----
E
S
T
V
Q
V
H
Y
----
R
-
M
-
C
Q
--------------------
25
HHSearch
44.16
29%
-242
- C11 -
-
1YD6
-
UVRC_GEOKA
A:
[11-31]
------------------------------------------------------------------------------------
V
L
P
E
Q
P
G
-----------
C
Y
-
L
M
K
D
K
H
-
G
T
V
I
Y
V
--------------------------------