@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CH1103_074820T: (2019-03-29 )
DGCPVDIMINNQRYHWTNKPRNSSFEIVVQGQTVATVHLDEDCNVRL
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10..----....-.---.------20..--......----30--..--.----.--.-----...40.--......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGC
P
V
D
I
M
INN
Q
R
----
Y
HWT-N---K------PRNS--
S
F
E
I
V
V----QG--
Q
T
--
V
----
A
--
T
-----
V
H
LD-E--DCNVRL
34
Fugue
71.35
30%
1
- C6 -
-
4K7J
3
?
A:
[26-375]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTAS
D
G
I
A
-----
S
K
Q
R
----
V
S
L
F
-
A
---
K
------
P
L
L
A
--
E
Q
T
L
T
V
----
N
G
--
N
T
--
V
----
S
--
A
NGGGW
Q
V
L
D
-
T
--
G
A
A
L
P
L
39
Fugue
68.78
25%
-0
* C6 *
-
4HG6
2
?
B:
[36-702]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PWIIPLRPLAETAQVGPLFRLQGQQARAAFRLFLPTEAVGGTLTLAQRSSIDILPESSQIIVRMNDQEIGRFTPRQFGALGAVTMPLGEAVRAGDNLVTIEAQHRHRIYCGADAEFDLWTEVDLSQSGVALPAAAIGTEPTSFIAALTAQAESGRPVEIRTPTPPDEATLRTLAQALGRPLPDEALPLALSKPWSAETGPTYARITLLPSDADRVSIRRGGDGAVVLVLEHPPEGSPNASLVADLLGATPTLPPPTLPQIPPGRVVTLADMGVDTILTDNRYFNRDIDFQLPDDWLLL
A
S
Q
K
A
Q
I
G
I
D
-------
Y
G
F
A
G
G
---
L
------
P
E
G
A
--
L
L
L
V
K
V
----
N
G
--
T
T
--
V
----
R
--
M
-----
L
P
L
D
-
R
--
D
A
A
P
V
K
32
Fugue
66.05
28%
72
- C7 -
0.38
4OK4
-
EALGL_SACD2
A:
[30-733]
HPNLIVTEQDVANIAASWESYDAYAEQLNADKTNLDAFMAEGVVVPMPKDAGGGYTHEQHKRNYKAIRNAGFLYQVTGDEKYLTFAKDLLLAYAKMYPSLGEHPNRKEQSPGRLFWQSLNEAVWLVYSIQGYDAIIDGLAAEEKQEIESGVFLPMAKFLSVESPETFNKIHNLGTWAVAAVGMTGYVLGNDELVEISLMGLDKTGKAGFMKQLDKLFSPDGYYTEGPYYQRYALMPFIWFAKAIETNEPERKIFEYRNNILLKAVYTTIDLSYAGYFFPINDALKDKGIDTVELVHALAIVYSITGDNTLLDIAQEQGRISLTGDGLKVAKAVGEGLTQPYNYRSILLGDGADGDQGALSIHRLGEGHNHMALVAKNTSQGMGHGHFDKLNWLLYDNGNEIVTDYGAARYLNVEAKYGGHYLAENNTWAKQTIAHNTLVVNEQSHFYGDVTTADLHHPEVLSFYSGEDYQLSSAKEANAYDGVEFVRSMLLVNVPSLEHPIVVDVLNVSADKASTFDLPLYFNGQIIDFSFKVKDNKNVMKMLGKRNGYQHLWLR
N
T
A
P
V
G
D
--
A
S
E
R
----
A
T
W
I
-
L
---
D
------
D
R
F
Y
--
S
Y
A
F
V
T
STPS
K
K
--
Q
N
--
V
----
L
--
I
-----
A
E
L
G
A
N
--
D
P
N
Y
N
L
23
SP3
61.08
21%
45
- C7 -
0.37
1C0M
-
POL_RSVP
A:
[217-269]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLT
E
G
P
P
V
K
I
R
I
E
T
G
E
----
W
E
-----------------
K
--
G
W
N
V
L
V
----
W
G
--
R
G
--
Y
----
A
--
A
-----
V
K
N
R
-
D
--
T
D
K
V
I
W
30
SP3
57.54
25%
87
- C7 -
-
1LVK
-
?
?:
[34-94]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
I
W
Y
-
N
PDP
K
------
E
R
D
S
YE
C
G
E
I
V
S
----
E
T
--
S
D
--
S
----
F
--
T
-----
F
K
T
S
-
D
GQ
D
R
Q
V
K
K
43
Fugue
55.84
27%
27
- C7 -
0.35
5F4H
5
?
A:
[1-437]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNDLMLDKSALLFGVSKYLEKGIITGNVLIHKSLLAELERESNDGLVSAEIALDEVKKLKDITERILVNFEIVGDDSKKGEANELSREYCLEKGCIIVTADETQKKICDAMGIQYNFLQPLKQGLSFESFFDDETMSLHIKEDTVPRAKKGKPGNWKFVNLSDKPMLSTDVRMIANEIINAVRLIKGSFVEIE
R
R
G
S
L
I
I
Q
L
G
N
Y
R
----
V
V
I
T
-
R
---
P
------
P
L
S
D
--
G
W
E
I
T
I
----
T
R
--
P
V
--
V
RKRL
E
--
D
-----
Y
N
L
D
-
E
--
R
L
I
K
R
L
25
SP3
51.53
19%
-92
- C7 -
0.12
1KJK
-
VINT_LAMBD
A:
[11-59]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
P
P
N
L
Y
I
R
N
N
G
----
Y
Y
C
Y
-
R
---
D
------
P
R
T
G
--
K
E
F
G
L
G
----
R
D
--
R
R
--
I
----
A
--
I
-----
T
E
A
I
-
Q
---
A
N
I
E
L
29
SP3
51.19
14%
105
- C7 -
0.49
1RL6
-
RL6_GEOSE
A:
[7-81]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PIEIP
A
G
--
V
T
V
T
V
N
G
N
T
----
V
T
V
K
-
G
---
P
KGELTR
T
F
H
P
--
D
M
T
I
T
V
----
E
G
--
N
V
--
I
----
T
--
V
-----
T
R
P
S
-
D
--
E
K
H
H
R
A
28
SP3
50.77
23%
1
- C7 -
0.18
1IGQ
-
KORB2_ECOLX
A:
[305-358]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKAIVQVEH
D
E
R
P
A
R
L
I
L
N
R
R
P
PAEG
Y
A
W
L
-----
K
------
Y
E
D
D
--
G
Q
E
F
E
A
----
N
L
--
A
D
--
V
----
K
--
L
-----
V
A
L
I
-
E
--
G
-----
13
HHSearch
48.46
27%
-382
* C9 *
-
2CO3
-
?
A:
[102-129]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
W
N
G
V
N
----
W
M
---
T
---
F
------
N
S
N
D
--
T
L
D
I
V
L
----
T
G
PA
Q
N
--
V
----
T
----------------------
38
Fugue
47.01
14%
130
- C7 -
0.14
3SHS
-
?
A:
[2-304]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTK
D
D
Q
P
H
E
N
N
T
A
T
L
T
----
V
A
D
A
-
T
---
S
------
E
N
A
G
--
S
Y
K
V
T
V
----
Q
D
--
T
D
--
T
----
M
--
T
-----
S
V
E
S
-
E
--
V
F
L
M
E
E
3
HHSearch
46.85
46%
-100
- C10 -
-
1MS9
-
?
B:
[479-506]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
S
Q
Q
G
Q
N
Q
R
----
Y
H
F
A
-
N
---
H
------------
A
F
T
L
--------------
V
----
A
--
S
-----
V
T
I
H
-
E
--------
27
SP3
46.05
17%
-27
- C7 -
0.36
1QGB
-
FINC_HUMAN
A:
[17-60]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SK
P
G
C
-
Y
D
---
N
G
K
H
----
Y
Q
---------------
I
N
Q
--
Q
W
E
R
T
Y
----
L
G
--
N
A
--
L
----
V
--
C
-----
T
C
Y
G
-
G
--
S
R
G
F
N
C
14
HHSearch
45.84
27%
-372
- C9 -
-
3CRF
-
?
B:
[102-129]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
W
N
G
V
N
----
W
M
---
T
---
F
------
N
S
N
D
--
T
L
D
I
V
L
----
T
G
PA
Q
N
--
V
----
T
----------------------
31
Fugue
44.77
24%
-35
- C1 -
-
2MXM
-
HPR3_THRPR
A:
[1-33]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
C
L
K
----
F
G
W
K
-
C
---
N
------
P
R
N
D
--
K
C
C
-------
S
G
--
L
K
--
C
----
G
--
S
-----
N
H
---
N
--
W
C
K
L
H
L
37
Fugue
44.27
15%
-12
- C4 -
-
1C01
-
AMP1_MACIN
A:
[1-76]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAFTVWSG
P
G
C
N
N
R
A
E
R
Y
S
K
C
-----
G
C
S
-
A
---
I
------
H
Q
K
G
--
G
Y
D
F
S
Y
----
T
G
--
Q
T
-------
A
--
A
-----
L
Y
N
Q
-
A
--
G
C
S
G
V
A
44
Fugue
44.22
10%
26
- C3 -
-
1AUV
-
SYN1_BOVIN
A:
[112-227]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
R
V
L
L
V
I
D
E
P
H
----
T
D
W
A
-
K
---
Y
FKGK--
K
I
H
G
--
E
I
D
I
K
V
----
E
Q
--
A
E
--
F
----
S
DL
N
-----
L
V
A
H
-
A
--
N
G
G
F
S
V
26
SP3
43.71
12%
13
- C7 -
1B7T
-
MYS_ARGIR
A:
[29-131]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
G
K
K
----
N
C
W
V
-
P
---
D
------
E
K
E
G
--
F
A
S
A
E
I
----
Q
S
--
S
K
GD
E
----
I
--
T
-----
V
K
I
V
-
A
--
D
S
S
T
R
T
7
HHSearch
43.45
38%
-507
- C6 -
-
2B1Y
-
?
A:
[19-34]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
--
T
----
L
--
E
-----
I
S
L
S
-
S
--
V
N
N
V
R
L
5
HHSearch
43.02
11%
-119
- C8 -
-
1I8F
1
?
A:
[47-80]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
L
L
E
D
A
E
----
E
I
I
D
-
G
---
N
------
V
Y
K
R
--
G
-
T
M
V
V
----
R
G
--
E
N
--
V
----
L
--
F
-----
I
S
P
V
-
P
--------