@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BF0072_065820T0_kcl65: (2019-03-28 )
RDCRLYYCWGPGSDNRRVVGTVDKGGSWKDYVNGETITVKAGKDCKAEIIGGKTCDMMPSFSWCLVNA
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...---.....---.-10-..-....------...20.---.-...-----.--------.--.-----30-.---..---.--.-..-------.--.----40--..-..---.....50----------...-------....-----..60----.......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RD
C
---
R
L
Y
Y
C
---W-G--PG-SDN
R
------
R
V
V
G
T
V---D-KGG-----S--------W--K-----D--Y---VN---G--
E
-
T
I
-------
T
--
V
----K---AG-KD---
C
K
A
E
II-----------GGK-------TCDM-----MPSF----
S
W
C
L
VNA
14
Fugue
64.91
27%
-13
- C5 -
0.24
2LU7
-
A:
[1-82]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
---
R
V
R
S
------
T
--
P
G
-
G
D
L
E
------
L
V
V
H
L
S
---
G
-
P
G
G
-----
P
--------
V
--
R
-----
W
--
Y
---
K
D
---
G
--
E
-
R
L
ASQGRVQ
L
--
E
----
Q
---
A
G
-
A
R
---
Q
V
L
R
V
Q
-----------
G
A
R
SGDAGEY
L
C
D
A
-----
P
Q
D
S
----
R
I
F
L
V
S
V
7
Fugue
62.71
24%
89
- C5 -
0.41
2MYW
-
?
A:
[7-85]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLYFQGHMAAPA
R
F
C
---
V
Y
Y
D
------
G
--
H
L
-
P
A
T
R
------
V
L
L
M
Y
V
---
R
-
I
G
T
-----
T
--------
A
--
T
-----
I
--
T
---
A
R
---
G
--
H
-
E
F
-------
E
--
V
----
E
---
A
K
D
Q
N
---
C
K
V
I
L
T
-----------
N
G
K
-------
Q
A
--------
P
D
W
----
L
A
A
E
P
Y
-
21
Fugue
62.14
19%
-11
* C8 *
-
5IP4
-
DCX_HUMAN
D:
[5-84]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
F
VRP
K
L
V
T
I
---
I
-
R
--
S
G
-
V
K
P
R
------
K
A
V
R
V
L
LNK
K
-
T
A
H
-----
S
--------
F
--
E
-----
Q
--
V
---
L
T
---
D
IT
E
-
A
I
-------
K
--
L
----
E
---
T
G
-
V
V
---
K
K
L
Y
T
L
-----------
D
G
K
-------
Q
V
T
C
-----
L
H
D
F
FGDD
D
V
F
I
A
C
G
15
Fugue
57.23
35%
-45
* C7 *
-
3RFU
-
COPA_LEGPH
A:
[74-736]
VSPEYLDMRRRFWIALMLTIPVVILEMGGHGLKHFISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIP
V
D
---------------------------------
G
E
V
---
Q
-
E
G
R
-----
S
--------
F
--
V
-----
D
ES
M
---
V
T
---
G
--
E
-
P
I
-------
P
--
V
----
A
---
K
E
-
A
S
-----
A
K
V
I
-----------
G
A
--------
T
I
N
Q
-----
T
G
S
F
----
V
M
K
A
L
H
V
45
SP3
55.37
20%
42
- C5 -
0.27
1JI1
-
NEPU1_THEVU
A:
[555-637]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFMTLIT
D
D
T
---
N
K
I
Y
S
---
Y
-
G
--
R
F
-
D
N
V
N
------
R
I
A
V
V
L
---
N
-
N
D
S
-----
V
SHTVNVPV
W
--
Q
L----
S
--
M
---
P
N
---
G
--
S
-
T
V
-------
T
--
D
----
K
I--
T
G
-
H
S
---
Y
T
V
Q
-------------
N
G
M
V------
T
V
A
V
-----
D
G
H
Y
----
G
A
V
L
A
Q
-
6
Fugue
52.32
17%
53
- C6 -
-
4EYT
-
?
A:
[10-106]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
Q
N
---
C
L
I
K
I
---
I
-
N
IP
Q
G
-
T
L
K
A
------
E
V
V
L
A
V
---
R
-
H
L
G
-----
Y
EF------
Y
--
C
-----
D
--
Y
---
I
D
---
G
--
Q
-
A
M
-------
I
--
R
FQNS
D
---
E
Q
-
R
L
---
A
I
Q
K
L
L
NHNNNKLQIEI
R
G
Q
-------
I
C
D
V
-----
I
S
T
I
----
P
E
D
E
E
K
N
43
SP3
51.20
22%
-29
- C5 -
0.35
1C01
-
AMP1_MACIN
A:
[1-76]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
F
T
V
---
W
S
G
--
P
G
-
C
N
N
R
AERYSK
C
G
C
S
A
I
---
H
-
Q
K
G
-----
G
--------
Y
--
D
-----
F
--
S
---
Y
T
---
G
--
Q
-
T
A
-------
A
--
L
YN--
Q
---
A
G
-
C
S
---
G
V
A
H
T
R
-----------
F
G
S
-------
S
A
R
A
-----
C
N
P
F
----
G
W
K
S
I
F
I
48
SP3
50.08
19%
-28
- C8 -
-
1G5A
-
AMYS_NEIPO
A:
[555-628]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
L
V
-------
T
--
F
N
-
T
N
N
K
------
H
I
I
G
Y
I
---
R
-
N
N
A
LLAFG
N
--------
F
--
S
-----
E
--
Y
PQT
V
T
---
A
--
H
-
T
L
-------
Q
--
A
----
M
---
P
F
-
K
-----
A
H
D
L
I
-----------
G
G
K
-------
T
V
S
L
NQDLT
L
Q
P
Y
----
Q
V
M
W
L
E
I
51
SP3
49.56
16%
58
- C5 -
0.28
1YEZ
-
?
A:
[1-68]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MF
R
E
E
---
S
R
S
-------
V
--
P
V
-
E
E
G
E
------
V
Y
D
V
T
I
QDI
A
-
R
Q
G
-----
D
--------
G
--
I
-----
A
--
R
---
I
E
---
G
--
F
-
V
I
-------
F
--
V
----
P
GTK
V
G
-
D
E
---
V
R
I
K
V
E
-----------------------
R
V
-----
L
P
K
F
----
A
F
A
S
V
V
E
49
SP3
48.64
14%
-27
- C5 -
0.19
1WAP
2
MTRB_BACSU
A:
[8-75]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
V
V
---
I
-
K
--
A
V
-
E
D
G
V
------
N
V
I
G
L
T
-----
R
G
T
-----
D
--------
T
--
K
FHHSE
K
--
L
---
D
K
---
G
--
E
-
V
I
-------
I
--
A
----
Q
---
F
T
-
E
H
---
T
S
A
I
K
V
-----------
R
G
E
-------
A
L
-
I
-----
Q
T
A
Y
----
G
E
M
K
S
E
K
47
SP3
48.26
13%
43
- C5 -
-
1BAG
-
?
?:
[348-425]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPEELSNPNGNNQIFMNQ
R
G
S
---
H
G
V
V
L
---
A
-
N
--
A
G
-
S
S
S
V
------
S
I
N
T
A
T
---
K
L
P
D
G
-----
R
--------
Y
--
D
-----
N
--
K
---
A
G
---
A
--
G
-
S
F
-------
Q
--
V
----
N
---
D
G
-
K
----
L
T
G
T
I
N
-----------
A
R
S
-------
V
A
V
L
-----
Y
P
D
------------
19
Fugue
47.47
13%
-9
- C6 -
-
4PWU
1
MZRA_KLEP7
A:
[3-78]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQ
Q
E
A
---
T
L
A
I
R
PVG
Q
-
G
--
I
G
M
P
D
G
F
------
S
V
W
H
H
L
---
D
-
A
N
G
-----
I
--------
R
FK
S
-----
I
--
T
---
P
Q
---
K
--
D
-
G
L
-------
L
--
I
----
K
---
F
D
-
S
T
---
A
Q
G
A
A
A
-----------
K
E
V
-------
L
G
R
A
-----
L
P
H
G
----
Y
I
I
A
L
L
E
5
PsiBlast_PDB
44.23
35%
102
- C10 -
-
1EAL
-
FABP6_PIG
A:
[33-77]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
------
K
I
I
S
E
V
---
K
-
Q
D
G
QNF--
T
--------
W
S-
Q
-----
Q
--
Y
---
P
G
---
G
--
H
-
S
I
-------
T
NT
F
----
T
---
I
G
-
K
E
---
C
D
I
E
T
I
-----------
G
G
K
-------------------------------
10
Fugue
43.18
17%
32
- C5 -
0.08
2JUB
-
IPI1_BPT4
A:
[1-76]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATLTSEVIKANKG
R
E
G
---
K
P
M
I
---------
S
L
-
V
D
G
E
------
E
I
K
G
T
V
---
Y
-
L
G
D
-----
G
--------
W
--
S
-----
A
--
K
---
K
D
---
G
--
A
-
T
I
-------
V
--
I
----
S
---
P
A
-
E
E
---
T
A
L
F
K
A
-----------
K
H
I
-------
S
A
A
H
-----
L
K
I
I
----
A
K
N
L
L
--
20
Fugue
42.60
16%
54
- C5 -
0.39
5A6W
4
?
C:
[11-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLS
R
E
R
---
D
P
N
F
F
---
D
-
H
--
P
G
-
I
P
V
P
------
E
C
F
W
F
M
---
F
-
K
N
N
-----
V
--------
R
--
Q
-----
D
--
A
---
G
T
CYS
S
--
W
-
K
M
-------
D
--
M
----
K
---
V
G
-
P
----
N
W
V
H
I
K
-----------
S
D
D
-------
N
C
N
L
-----
S
G
D
F
PP--
G
W
I
V
L
G
K
4
PsiBlast_PDB
42.57
35%
107
* C10 *
-
1EIO
1
FABP6_PIG
A:
[33-77]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
------
K
I
I
S
E
V
---
K
-
Q
D
G
QNF--
T
--------
W
S-
Q
-----
Q
--
Y
---
P
G
---
G
--
H
-
S
I
-------
T
NT
F
----
T
---
I
G
-
K
E
---
C
D
I
E
T
I
-----------
G
G
K
-------------------------------
11
Fugue
41.91
18%
16
- C6 -
-
2G31
-
A:
[1-60]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
I
Y
-------------
K
G
V
I
------
Q
A
I
Q
K
S
---
D
-
E
G
H
-----
P
--------
F
--
R
-----
A
--
Y
---
L
E
---
S
--
E
V
A
I
-------
S
--
E
----
E
---
L
V
-
Q
K
---
Y
S
N
S
A
L
-----------
G
H
V
-------
N
C
T
I
-----
K
E
L
R
----
R
L
F
L
V
D
D
52
SP3
41.89
13%
59
- C5 -
-
1PWT
-
?
?:
[1-61]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
G
-
T
G
K
E
------
L
V
L
A
L
Y
---
D
-
Y
Q
E
-----
K
--------
S
--
P
-----
R
--
E
---
V
T
MKK
G
--
D
-
I
L
-------
T
--
L
----
L
---
N
S
-
T
N
KDW
W
K
V
E
V
------------
N
D
R
-------
Q
-
G
F
-----
V
P
A
A
----
Y
V
K
K
L
D
-
25
HHSearch
37.50
50%
-257
- C7 -
-
5JI4
-
?
A:
[6-21]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
V
N
---
G
--
E
-
T
Y
-------
T
--
V
----
S
---
S
S
-
E
E
---
C
E
-------------------------------------------------
41
HHSearch
37.43
25%
-181
- C6 -
-
1PNE
1
PROF1_BOVIN
A:
[1-24]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-----
G
--------
W
--
N
-----
A
--
Y
---
I
D
------
N
--
L
----------
M
----
A
---
D
G
-
T
C
---
Q
D
A
A
I
V
-----------
G
Y
--------------------------------