@TOME V2.3
(Mar 2018)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_BR29_EuGene_00096771: (2018-03-20 )
ECWVELFGPGKVSHGKQTGRWNAPYYFNLDPMRLIYLHENCKVNEKHTVLLPDNVKWDVETGMIS
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....--...----------------.10..------.---...---..20--.--..-----.------.---.------..-.30.--....-..-..40...--...---...50.-------.--...-..-..-------60.-...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
C
W
V
E
--
L
FG----------------PGKVS------H---GKQ---TGR---W--NA-----
P
------
Y
---
Y
------FN-LD-
P
--
M
R
L
I
-
Y
L
-HEN-CKV--NE
K
---
H
T
V
L-L-------P--DN
V
-
K
W
-
D
V-------ETG-MIS
44
SP3
66.54
21%
-7
- C12 -
-
1I4F
1
B2MG_HUMAN
B:
[1-100]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIQRTPKIQVYSRHPAENGKSNFL
N
C
Y
V
S
--
G
F
H
----------------
P
S
D
I
E
VDLLK-
N
---
G
E
R
I--
E
K
V
---
E
--
H
S
-----
D
------
L
---
S
------
F
S
-
K
D
-
W
SF
Y
L
L
Y
-
Y
T
-
E
F
T
-
P
T
E
--
K
D
E
---
Y
A
C
R
-
V
NHVTLSQ
P
--
K
I
V
-
K
W
-
D
R
-------
D
M
-----
43
SP3
66.54
21%
-7
- C12 -
-
1I4F
1
B2MG_HUMAN
B:
[1-100]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIQRTPKIQVYSRHPAENGKSNFL
N
C
Y
V
S
--
G
F
H
----------------
P
S
D
I
E
VDLLK-
N
---
G
E
R
I--
E
K
V
---
E
--
H
S
-----
D
------
L
---
S
------
F
S
-
K
D
-
W
SF
Y
L
L
Y
-
Y
T
-
E
F
T
-
P
T
E
--
K
D
E
---
Y
A
C
R
-
V
NHVTLSQ
P
--
K
I
V
-
K
W
-
D
R
-------
D
M
-----
40
SP3
57.68
27%
48
- C9 -
-
1LVA
-
A:
[135-198]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FS
E
T
Q
K
K
--
L
L
K
------------------
D
L
E
------
D
---
K
Y
R
---
V
S
R
---
W
--
Q
P
-----
P
------
S
---
F
KEVAGS
F
N
-
L
D
-
P
--
S
E
L
E
E
L
L
-
H
Y
---
L
V
--
R
E
G
---
V
L
V
K
-
I
-------
N
--
D
E
F
-
Y
W
-
H
R
--------------
1
PsiBlast_PDB
57.32
44%
-209
* C15 *
-
5CDI
-
?
A:
[193-221]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
M
Q
---
F
E
R
---
G
--
Y
T
-----
S
------
P
---
Y
------
F
V
-
T
D
-
P
--
E
R
M
I
-
C
E
-
Y
E
N
-
C
K
I
-----------------------------------------------
45
SP3
56.68
21%
-77
* C9 *
-
1CSE
-
ICIC_HIRME
I:
[8-70]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
F
P
E
--
V
V
G
-------------------
K
T
----------
V
D
Q
-------------
A
-----
R
------
E
---
Y
------
F
T
-
L
H
Y
P
Q-
Y
N
V
Y
-
F
L
-
P
E
G
-
S
P
V
--
T
L
D
------
L
-
R
-------
Y
--
N
R
V
R
V
F
Y
N
P
-------
G
T
N
-
V
V
N
30
Fugue
55.62
28%
28
- C6 -
-
4Z13
6
?
A:
[3-519]
LAPITAPDITSICKDASSGIGNQEGAIRTRKCCPPSLGKKIKDFQFPNDKKVRMRWPAHKGTKKQVDDYRRAIAAMRALPDDDPRSFVSQAKIHCAYCNGGYTQVDSGFPDIDIQIHNSWLFFPFHRWYLYFYERILGSLIDEPNFALPYWKWDEPKGMPISNIFLGDASNPLYDQYRDANHIEDRIVDLDYDGKDKDIPDQQQVACNLSTVYRDLVRNGVDPTSFFGGKYVAGDSPDPSVGSVEAGSHTAVHRWVGDPTQPNNEDMGNFYSAGYDPVFYIHHANVDRMW
K
L
W
K
E
--
L
R
L
----------------
P
G
H
V
D
-----------
I
T
---
D
P
D
---
W
L-
N
A
-----
S
------
Y
---
V
------
F
Y
-
D
E
-
N
--
K
D
L
V
-
R
V
Y
N
K
D
-
C
V
N
--
L
D
K
---
L
K
Y
N
-
F
-------
I
--
E
N
S
-
K
-----------
E
V
F
-
P
W
R
39
SP3
55.28
23%
-44
- C9 -
-
1LW6
-
ICI2_HORVU
I:
[2-64]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K
T
E
W
P
E
--
L
V
G
-------------------
K
S
----------
V
E
E
-------------
A
-----
K
------
K
---
V
------
I
L
-
Q
D
K
P
A-
A
Q
I
I
-
V
L
-
P
V
G
-
T
I
V
--
T
M
------
E
Y
-
R
-------
I
--
D
R
V
-
R
L
-
F
V
D------
K
L
D
-
N
I
A
36
SP3
54.32
18%
51
- C9 -
-
1DWM
1
ICI_LINUS
A:
[1-69]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SR
R
C
------------------------
P
G
K
N
A
------
W
---
P
E
L
---
V
G
K
------
S
G
-----
N
------
M
AAA
T
------
V
E
-
R
E
N
R
N-
V
H
A
I
-
V
L
-
K
E
G
-
S
A
M
--
T
K
D
FRC
D
R
V
W
-
V
-------
I
--
V
N
D
-
H
G
-
V
V
T------
S
V
P
-
H
I
T
26
Fugue
52.96
23%
63
* C12 *
-
4M02
1
A:
[36-204]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVTQVRYVDVTTGKDIIPPKTYSGNVDQVVTIDNQQSALTAKGYNYTSVDSSYASTYNDTNKTVKMTNAGQSV
T
Y
Y
F
T
--
D
V
K
----------------
A
P
T
V
T
------
V
---
G
N
Q
---
T
I
E
---
V
--
G
K
------------------------
T
-
M
N
-
P
--
I
V
L
--
T
T
-
T
D
N
-
G
T
G
--
T
V
T
---
N
T
V
T
G
L
-------
P
--
S
G
L
-
S
Y
-
D
S
-------
A
T
N
-
S
I
I
2
PsiBlast_PDB
52.54
43%
-193
- C15 -
-
5CDK
-
?
A:
[7-28]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
--
T
S
-----
P
------
Y
---
F
------
V
T
--
D
-
P
--
E
R
M
I
-
C
E
-
Y
E
N
-
C
K
I
-----------------------------------------------
27
Fugue
52.46
21%
3
- C9 -
-
5LQJ
1
COMT_RAT
A:
[3-216]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTKEQRILRYVQQNAKPGDPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILN
G
A
S
Q
D
--
L
I
P
----------------
Q
L
K
K
K
------
Y
---
D
V
D
---
T
L
D
---
M
--
V
F
-----
L
------
D
---
H
------
W
K
-
D
R
-
Y
--
L
P
D
T
-
L
L
-
L
E
K
-
C
G
L
--
L
R
K
---
G
T
V
L
-
L
-------
A
--
D
N
V
-
I
V
-
P
G
-------
T
P
D
-
F
L
A
42
SP3
50.86
12%
-41
- C12 -
-
2BOP
-
A:
[1-85]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
C
F
A
L
--
I
S
G
TANQVKCYRFRVKKNH
R
H
R
Y
E
------
N
---
C
T
T
---
T
W
F
---
T
--
V
A
-----
D
------
N
---
G
------
A
E
R
Q
G
-
Q
--
A
Q
I
L
-
I
T
-
F
G
S
-
P
S
Q
--
R
Q
D
FL-
K
H
V
P
-
L
-------
P
--
P
G
M
-
N
I
-
S
G
-------
F
T
A
-
S
L
D
38
SP3
49.73
18%
36
- C7 -
-
1WM2
-
SUMO2_HUMAN
A:
[12-89]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEN
N
D
H
I
N
--
L
K
V
----------------
A
G
Q
--------
D
---
G
S
V
VQF
K
I
K
---
R
--
H
T
-----
P
LSKLMK
A
---
Y
CER---
Q
G
-
L
S
-
M
--
R
Q
I
R
-
F
R
-
F
D
G
-
Q
P
I
--
N
E
T
---
D
T
-----------
P
--
A
Q
L
----
E
M
-------
E
D
E
D
T
I
D
32
Fugue
47.78
25%
37
* C16 *
-
4Y2H
3
ANM6_HUMAN
B:
[1-352]
-------------------------SIAAEREAALERPRRTKRERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIAPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGF
A
I
W
F
Q
--
V
T
F
----------------
P
G
G
E
S
------
E
---
K
P
L
VLS
T
S
P
---
F
--
H
P
-----
A
------
T
---
H
------
W
K
-------
Q
A
L
L
-
Y
L
-
N
E
P
-
V
Q
V
--
E
Q
D
---
T
D
V
S
------------------------------
G
-
E
I
T
41
SP3
46.51
18%
-16
- C5 -
-
1I71
-
A:
[1-83]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
C
Y
H
G
DG
Q
S
Y
----------------
R
G
S
F
S
------
T
TVT
G
R
T
---
C
Q
S
---
W
--
S
S
MT---
P
------
H
---
W
HQ----
R
T
-
T
E
-
Y
--
Y
P
N
G
-
G
L
-
T
R
N
Y
C
R
N
PD
A
E
I
---
R
P
W
C
-
Y
-------
T
MD
P
S
V
-
R
W
-
E
Y
CNLTQCP
V
M
E
----
33
Fugue
46.38
20%
1
- C9 -
-
1WJA
-
POL_HV1Y2
A:
[1-46]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
L
D
--
G
I
D
----------------
K
A
Q
E
E
------
H
---
E
K
Y
---
H
S
N
---
W
--
R
A
M----
A
------
S
---
D
------
F
N
-
L
P
-
P
--
V
V
A
K
-
E
I
-
V
A
S
-
C
D
K
--
C
Q
L
---
K
--------------------------------------
35
Fugue
45.69
23%
-0
- C16 -
-
4QPP
2
ANM6_HUMAN
A:
[48-376]
------------------------------------------------YYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGF
A
I
W
F
Q
--
V
T
F
----------------
P
G
G
E
S
------
E
---
K
P
L
---
V
L
S
TSP
F
--
H
P
-----
A
------
T
---
H
------
W
K
-------
Q
A
L
L
-
Y
L
-
N
E
P
-
V
Q
V
--
E
Q
D
---
T
D
V
S
------------------------------
G
-
E
I
T
10
HHSearch
44.66
27%
49
- C4 -
-
4JQR
7
?
A:
[187-227]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
F
D
--
L
T
P
----------------
L
Q
N
A
V
KVKFIP
D
---
S
S
D
---
K
N
E
---
Y
GM
N
T
-----
A
------
S
---
Y
------
F
C
-
L
D
-
G
--
I
T
L
I
----------------------------------------------------------
4
HHSearch
44.19
37%
-83
- C11 -
-
2J0A
-
MFNG_MOUSE
A:
[233-264]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
------
Y
---
G
V
F
---
E
G
K
---
L
--
N
V
IKLPG
P
------
F
---
S
------
H
E
-
E
D
-
P
--
S
R
F
R
-
S
L
-
H
-----------------------------------------------------
3
PsiBlast_PDB
43.30
42%
-15
* C11 *
-
2BE7
-
?
D:
[76-103]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
-
P
--
N
A
T
I
-
N
I
-
I
E
N
-
F
K
V
--
T
D
K
---
H
S
L
T
-
L
-------
P
--
N
E
V
-
E
------------------