@TOME V2.3
(Mar 2018)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : XP_007600144_1_CF: (2018-03-15 )
GCQAELLNINQAVVGTGCVQMNYYANIYDSTRRAGYTVNANSNCGLSFGNIQVIPDGYSLRQAGYC
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------..-.....---..10--------.....---------...20---..-----..--....-.30.-------------.----------------..-.---...40..--------.----------.---------------....----------50..------.-----.------.-.----..60.---....------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------GC-Q
A
E
L
L---NINQ--------
A
V
VG
T
---------
G
C
V
Q
----
M
N
-----
Y
Y
--
A
N
I
Y-DSTR-------------R----------------A
G
-
Y
---
T
VNANSN--------C----------
G
---------------
L
S
FG----------
N
I
Q
V
------I-----P------D-G----YSLRQ---AGYC------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
86.75
41%
-130
- C2 -
-
2MM0
-
?
A:
[2-64]
----------------------------------------------------------------------------------------------------------------------------------------------------------
C
-
V
A
N
I
L
---
N
I
N
E
--------
A
V
I
A
T
---------
G
C
V
P
----
A
G
-----
G
E
--
L
R
I
F
-
V
G
S
S
-------------
H
----------------
S
--
Y
---
L
I
K
A
T
S
S
--------
C
----------
G
---------------
L
S
L
T
----------
N
-
Q
V
------
F
-----
I
------
N
-
G
----
E
S
V
Q
S
---
G
G
R
C
------------------------------------------------------------------------------------------------------------
3
HHSearch
83.07
41%
-128
- C2 -
-
2MM0
-
?
A:
[1-64]
---------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
-
V
A
N
I
L
---
N
I
N
E
--------
A
V
I
A
T
---------
G
C
V
P
----
A
G
-----
G
E
--
L
R
I
F
-
V
G
S
--------------
S
----------------
H
S
-
Y
---
L
I
K
A
T
S
S
--------
C
----------
G
---------------
L
S
L
T
-----------
N
Q
V
------
F
-----
I
------
N
-
G
----
E
S
V
Q
S
---
G
G
R
C
------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
82.39
36%
-132
- C2 -
-
2MM2
-
?
A:
[2-65]
----------------------------------------------------------------------------------------------------------------------------------------------------------
C
-
T
A
N
I
L
---
N
I
N
E
--------
V
V
I
A
T
---------
G
C
V
P
----
A
G
-----
G
N
--
L
I
I
R
-
V
G
S
D
-------------
H
----------------
S
--
Y
---
L
I
R
A
T
V
S
--------
C
----------
G
---------------
L
S
L
N
----------
P
S
Q
S
------
F
-----
I
------
N
-
G
----
E
S
L
A
S
---
G
G
R
C
------------------------------------------------------------------------------------------------------------
13
Fugue
79.24
36%
-120
* C2 *
-
2MM2
-
?
A:
[1-65]
---------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
-
T
A
N
I
L
---
N
I
N
E
--------
V
V
I
A
T
---------
G
C
V
P
----
A
G
-----
G
N
--
L
I
I
R
-
V
G
S
D
------------------------------
H
S
-
Y
---
L
I
R
A
T
V
S
--------
C
----------
G
---------------
L
S
L
N
----------
P
S
Q
S
------
F
-----
I
------
N
-
G
----
E
S
L
A
S
---
G
G
R
C
------------------------------------------------------------------------------------------------------------
22
Fugue
45.91
15%
29
- C4 -
-
1HQB
-
DLTC_LACP3
A:
[2-81]
------------------------------------------------------------------------------------------------------------------------------------------------------ADE
A
I
-
K
N
G
V
L
---
D
I
L
A
--------
D
L
T
G
S
---------
D
D
V
K
----
K
N
LDLNL
F
E
--
T
G
L
L
-
D
S
M
G
-------------
T
----------------
V
Q
-
L
---
L
L
E
L
Q
S
Q
--------
F
----------
G
---------------
V
D
A
P
----------
V
S
E
F
DRKEWD
T
-----
P
------
N
-
K
----
I
I
A
K
V
---
E
Q
A
Q
------------------------------------------------------------------------------------------------------------
12
HHSearch
45.72
15%
-153
- C6 -
-
5F5E
1
A:
[19-52]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-
V
---
G
V
Y
R
S
P
I
--------
H
----------
G
---------------
R
G
L
F
----------
C
K
R
N
------
I
-----
D
------
A
-
G
----
E
M
V
---------------------------------------------------------------------------------------------------------------------
19
Fugue
45.63
19%
-2
* C5 *
-
1C4Q
-
STXB_BPH19
A:
[1-69]
-------------------------------------------------------------------------------------------------------------------------------------------------------TP
D
C
-
V
T
G
K
V
---
E
Y
T
K
Y
N
DDD
T
F
T
V
K
V
G
D
---------
K
E
L
A
----
T
N
-----
R
A
NL
Q
S
L
L
-
L
S
A
Q
-------------
I
----------------
T
G
-
M
---
T
V
T
I
K
T
N
A-------
C
--------------------------------------------------------
H
------
N
-
G
----
G
G
F
S
E
---
V
I
F
R
------------------------------------------------------------------------------------------------------------
32
SP3
42.95
12%
-5
- C7 -
-
1V88
-
A:
[1-130]
--------------------------------------------------------------------------------------------------------------------------GSSGSSGIVMA
D
W
L
K
I
RGTLKSWTK
L
W
C
V
L
K
P
G
-
V
L
L
I
Y
---
K
T
Q
K
--------
N
G
Q
W
V
---------
G
T
V
L
----
L
N
-----
A
C
--
E
I
I
E
-
R
P
S
K
-------------
K
----------------
D
G
-
F
---
C
F
K
L
F
H
P
--------
L
----------
E
---------------
Q
S
I
W
----------
A
V
K
G
------------
P
------
K
-
G
----
E
A
V
G
S
---
I
T
Q
P
L
P
S
S
Y
L
I
I
R
A
TS
E
S
D
G
R
C
W
M
D
A
L
E
L
A
L
K
S
GPSSG--------------------------------------------------------------------------
14
Fugue
42.21
18%
-8
- C2 -
-
2X5H
-
Y131_SIRV1
A:
[1-92]
-----------------------------------------------------------------------------------------------------------------------------------------G
M
A
S
L
K
E
I
I
D
E
L
G
K
Q
A
K
E
-
Q
N
K
I
A
---
S
R
I
M
--------
K
I
K
G
I
---------
K
R
I
V
----
V
Q
-----
L
N
--
A
V
P
Q
-
D
G
K
I
-------------
R
----------------
Y
S
-
M
---
T
I
H
S
Q
N
N
--------
F
----------
R
---------------
K
Q
I
G
I
T
PQD
A
E
D
L
K
L
I
A
E
------
F
-----
L
------
E
-
K
----
Y
S
D
F
L
---
N
E
Y
V
------------------------------------------------------------------------------------------------------------
8
HHSearch
39.66
9%
-68
- C2 -
-
2KZK
-
ATG34_YEAST
A:
[318-339]
---------------------------------------------------------------------------------------------------------------------------------------------------------
N
Y
-
T
M
K
V
V
---
N
Q
D
G
--------
E
T
I
L
V
---------
G
K
C
A
----
D
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
37.64
21%
-95
- C2 -
-
2KZB
-
ATG19_YEAST
A:
[332-359]
---------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
-
T
I
E
I
E
---
N
Q
Y
G
--------
E
V
I
F
L
---------
G
K
Y
G
----
S
S
-----
P
M
--
I
N
L
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
SP3
36.16
15%
-5
- C1 -
-
1IGR
-
IGF1R_HUMAN
A:
[300-478]
----------------------------------------------------------------------------------------------------------------------------------------------------
K
V
C
E
E
E
K
K
T
K
T
I
D
---
S
V
T
S
--------
A
Q
M
L
Q
---------
G
C
T
I
----
F
K
-----
G
N
--
L
L
I
N
-
I
R
R
G
-------------
N
NI
A
S
E
L
E
N
F
MGLIEVV
T
G
-
Y
---
V
K
I
R
H
S
H
--------
A
----------
L
---------------
V
S
L
S
----------
F
L
K
N
------
L
RL---
I
------
L
-
G
----
E
E
Q
L
E
---
G
N
Y
S
F
Y
V
L
DNQNLQQLWDWDH
R
N
L
T
I
K
A
G
K
M
Y
F
A
FNPKLCV
S
E
I
Y
R
M
E
E
V
T
GTKGRQSKGDINTRNNGERASCEKEQKLISEEDLN--------------------------
23
SP3
31.66
13%
4
* C3 *
-
1OI1
1
SCML2_HUMAN
A:
[11-221]
------------------------------------------------------------------------------------------------------------------------FH
W
E
E
Y
L
K
E
T
GSISAPSECFRQSQIPPVNDFKV
G
M
-
K
L
E
A
R
DPR
N
A
T
S
--------
V
C
I
A
T
---------
V
I
G
I
----
T
G
-----
A
R
--
L
R
L
R
L
D
G
S
D
-------------
N
----------------
R
N
D
F
---
W
R
L
V
D
S
P
--------
D
IQPVG
T
C
E
K
E
G
---------------
D
L
L
Q
----------
P
P
L
G
------
Y
-----
Q
------
S
W
P
----
M
F
L
L
E
T
L
-
N
G
S
E
MASATLFKKEPPKPPLNNFKVG
M
K
L
E
A
I
DKKNPY
L
I
C
P
A
T
IGDVKGD
E
V
H
I
T
F
D
GWSGA
F
D
Y
W
C
K
YDSRDIFPAG
W
C
R
L
T
G
D
V
L
Q
P
PGTS------------------
6
HHSearch
31.10
31%
4
* C8 *
-
1MJO
-
METJ_ECOLI
D:
[64-79]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
F
----------
T
G
Q
P
------
L
-----
P
------
D
-
D
----
A
D
L
R
K
---
E
---------------------------------------------------------------------------------------------------------------
7
HHSearch
30.51
31%
12
- C8 -
-
1CMC
-
METJ_ECOLI
B:
[64-79]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
F
----------
T
G
Q
P
------
L
-----
P
------
D
-
D
----
A
D
L
R
K
---
E
---------------------------------------------------------------------------------------------------------------
17
Fugue
29.68
15%
37
- C2 -
-
4BZ2
1
?
A:
[1-101]
-------------------------------------------------------------------------------------------------------------------------------------VE
F
K
R
M
CS
G
K
F
S
I
DKE
M
A
E
T
Q
H
-
G
T
T
V
V
---
K
V
K
Y
--------
E
G
A
G
A
---------
P
C
K
V
----
P
I
-----
E
I
--
R
D
V
--
N
K
E
K
-------------
V
----------------
V
G
-
R
---
I
I
S
S
T
P
F
--------
A
----------
E
YT-------------
N
S
V
T
----------
N
I
E
L
------
E
-----
P
------
P
F
G
----
D
S
Y
I
V
---
I
G
V
G
DS
A
L
T
L
H
W
F
R
K
H
H-----------------------------------------------------------------------------------------------
26
SP3
29.60
10%
-7
* C7 *
-
1QQK
-
FGF7_RAT
A:
[9-140]
----------------------------------------------------------------------------------------------------------------------------------------------D
I
R
V
R
R
L
F
C
RT
Q
W
-
Y
L
R
I
----
D
K
R
G
--------
K
V
K
G
T
---------
Q
E
M
R
----
N
S
-----
Y
N
--
I
M
E
I
-
R
T
V
A
-------------
V
----------------
G
I
-
V
---
A
I
K
G
V
E
S
E
Y
Y
L
A
M
N
K
E
----------
G
K
L
Y
A
K
----------
K
E
C
N
----------
E
D
C
N
------
F
K
E
L
I
L
E
------
N
-
H
Y
N
T
Y
A
S
A
K
W
---
G
G
E
M
FVALNQKG
L
P
V
K
GKKTKKEQKTA
H
F
L
P
M
A
IT-----------------------------------------------------------------------------
27
SP3
27.43
10%
-9
- C5 -
-
1IZ1
-
?
A:
[1-292]
ME
F
R
Q
L
K
Y
F
I
A
V
A
E
A
GN
M
A
A
A
A
K
R
L
HVSQ
P
P
I
T
R
Q
M
Q
A
L
E
A
D
L
GVVL
L
E
R
S
HR
G
I
E
L
T
A
A
G
H
A
F
L
E
D
A
R
R
I
L
E
L
A
G
R
S
G
D
R
S
R
A
A
A
R
GDV
G
E
L
S
V
A
Y
F
G
TPIYR
S
L
P
L
L
L
R
A
F
L
T
S
T
PT
A
T
V
S
L
T
H
M
T
K
D
E
Q
V
E
G
L
L
A
GTIH
V
G
F
S
R
F
FPRHP
G
I
-
E
I
V
N
I
---
A
Q
E
D
--------
L
Y
L
A
V
HRSQSGKFG
K
T
C
K
LADL
R
A
-----
V
E
--
L
T
L
F
-
P
R
G
G
-------------
R
----------------
P
S
-
F
A
D
E
V
I
G
L
F
K
H
--------
A
----------
G
---------------
I
E
P
R
----------
I
A
R
V
------
V
-----
E
------
D
-
A
----
T
A
A
L
A
L
T
M
A
G
A
A
S
S
I
V
P
A
S
V
A
A
IRWPD
I
A
F
A
R
I
V
G
TRVKVPI
S
C
I
F
RKEKQP
P
I
L
A
R
F
V
E
H
V
R
R
S
A------------------------------------------------------
30
SP3
27.26
15%
16
- C3 -
-
1ELV
1
A:
[70-328]
----------------------------------------------------------------------------------------------------------------------------
C
GVPREPFIIGGSDADIKNFPW
Q
V
F
F
DNP
W
A
-
G
G
A
L
I
---
N
E
Y
W
--------
V
L
T
A
A
---------
H
V
V
E
----
G
N
-----
R
E
--
P
T
M
Y
-
V
G
S
T
SVQK
M
L
T
P
E
H
V
F
I
H
----------------
P
G
-
W
---
K
L
L
A
V
P
E
--------
G
----------
R
TNFDND
I
A
L
V
R
L
K
D
P
V
K
M
G
----------
P
T
V
S
------
P
-----
I
C
L
P
G
TS
S
-
D
----
Y
N
L
M
D
---
G
D
L
G
L
I
S
GWGRTEKRDRAV
R
L
K
A
A
R
L
P
V
A
P
L
R
K
C
K
E
VA
Y
V
F
T
PN
M
I
C
A
G
GEKG
M
D
S
C
KGDSGGAF
A
V
Q
DPNDKTKFYAAGLVSWGPQCG
T
Y
G
L
Y
T
RVKNY
V
D
W
I
M
K
T
M
Q
E
N
S
11
HHSearch
24.72
22%
102
* C6 *
-
2LNJ
-
?
A:
[37-54]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
T
K
--------
D
----------
G
---------------
Y
E
F
--------------
L
------
Y
-----
P
------
N
-
G
----
W
I
G
V
D
-------------------------------------------------------------------------------------------------------------------