@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_05_0390: (2018-07-12 )
MSSRSYYSGSGTTAVVPHTISISTAETTPSQAPSSHTEQPSSDQQHESSLHQATASLPMSLNSTMNNKGASAAAAAAAAAPSSHGGDSHSIGAAAKASGSERANWNNPSFAAALRNSSGSINVDGYPPAQAHQQPSHPSLLSHSTDVDDEGDGAQHAAVNEPLEYCGVRLLPGVEQIDFDEGYYVGTIDENGEMAGYGKATWHSGDTYEGEWLNGMMHGKGTYTWADGDYYQGNYVRGRMEGRGEMKDATGLYTGEWADDMRQGYGRMLYAGGNVYEGEWLAGMRHGSGKLVEPAAHVTYEGEFNRNEKEGRGVQTNSDGDVYEGEFARGKPNGRGTYLWADGARYIGMFKDGVKHGDGCEWLANGDWVAGLFVDGEHVDSQSTRHKATVLTPDSSDADGGSEDGAGDGGAGGSRGSIGLSESTAAAVLAPLDAEKLRRIADQVHAPSFSMNVSAAAMRSLRSSLRKNSSSHYQDFSGPGGVTIEEASSPFLRSLAAPQMLLDDSDLEGWTPLKTIGKGSFGAVYTALLRNGRTVCCKVIELGTVESEEEMEKLRNEIALMRRLRHPNCVQYYGSLEDKVQNTLNIFMEYVSGGTLTSFVAKFKSIPLETLRQWVYQMVCGVKYLHECGIVHRDIKGDNVLVSVDGIVKLADFGCSKAIDDVCSATHGCSTMVGTPYWMAPEVIKCEAGGYGVKSDIWSIGCTIVEMLTGKPPWPECNSMWAAVYKIANSTGLPTEIPADIDPELMDLLQRCFERNPKLRPTAADMLSHPFLAKVTEGVASPLEKSGRK

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ATP_A_2(4XBR)
INKA1_HUMAN
[Raw transfer]



IE6_A_4(4BIE)
M3K5_HUMAN
[Raw transfer]



ADP_A_4(6FD3)
PAK3_HUMAN
[Raw transfer]



STU_A_3(2CLQ)
M3K5_HUMAN
[Raw transfer]



C7Y_A_3(6B16)
PAK1_HUMAN
[Raw transfer]



4T6_A_3(4ZY6)
PAK1_HUMAN
[Raw transfer]



IE4_A_3(4BIC)
M3K5_HUMAN
[Raw transfer]



9E1_A_5(5VIL)
M3K5_HUMAN
[Raw transfer]



STU_A_3(4BF2)
M3K5_HUMAN
[Raw transfer]



4T3_A_3(4ZY4)
PAK1_HUMAN
[Raw transfer]



8GV_A_4(5UOR)
M3K5_HUMAN
[Raw transfer]



6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]



9E4_A_5(5VIO)
M3K5_HUMAN
[Raw transfer]



8V7_A_3(5V24)
M3K5_HUMAN
[Raw transfer]



EDO_A_5(5VCZ)
PMYT1_HUMAN
[Raw transfer]
39 HHSearch 75.1936% -53 - C1 -4XBR 5.1 INKA1_HUMAN (first)
41 HHSearch 71.1335% -51 - C1 -5J5T 6.7 M4K3_HUMAN
9 PsiBlast_PDB 70.3134% -23 - C1 -4APC - NEK1_HUMAN -
10 PsiBlast_PDB 69.8334% -24 - C1 -4B9D - NEK1_HUMAN -
23 HHSearch 69.4126% -23 - C1 -2Y7J - PHKG2_HUMAN -
14 PsiBlast_PDB 67.9537% -30 - C1 -6FD3 5.8 PAK3_HUMAN
26 HHSearch 67.6226% -23 - C1 -2Y7J - PHKG2_HUMAN -
40 HHSearch 67.3228% -42 - C1 -4WOT - ROCK2_HUMAN -
45 Fugue 65.6426% -32 - C1 -2RIO - IRE1_YEAST -
17 PsiBlast_PDB 65.1736% -28 - C1 -6B16 5.7 PAK1_HUMAN
13 PsiBlast_PDB 64.8936% -40 - C1 -4ZJJ - PAK1_HUMAN -
12 PsiBlast_PDB 64.5036% -35 - C1 -4ZJI - PAK1_HUMAN -
38 HHSearch 63.6426% -43 - C1 -3C0I - CSKP_HUMAN -
20 PsiBlast_PDB 63.5534% -53 - C1 -4USF - SLK_HUMAN -
19 PsiBlast_PDB 62.9134% -54 - C1 -2JFM - SLK_HUMAN -
18 PsiBlast_PDB 62.8334% -55 - C1 -2J51 - SLK_HUMAN -
2 PsiBlast_PDB 61.8339% -0 - C1 -5VIL 6.5 M3K5_HUMAN
37 HHSearch 61.5926% -42 - C1 -3C0G - CSKP_HUMAN -
16 PsiBlast_PDB 61.4536% -26 - C1 -4ZY6 5.7 PAK1_HUMAN
15 PsiBlast_PDB 60.5136% -26 - C1 -4ZY4 5.6 PAK1_HUMAN
3 PsiBlast_PDB 60.4539% 2 - C1 -5VIO 5.3 M3K5_HUMAN
5 PsiBlast_PDB 59.7039% -12 - C1 -5V24 6.0 M3K5_HUMAN
8 PsiBlast_PDB 58.0339% -2 - C1 -4BIE 4.7 M3K5_HUMAN
1 PsiBlast_PDB 57.8939% 7 - C1 -2CLQ 6.1 M3K5_HUMAN
6 PsiBlast_PDB 57.6539% -5 - C1 -4BF2 6.7 M3K5_HUMAN
7 PsiBlast_PDB 57.1539% 3 - C1 -4BIC 4.7 M3K5_HUMAN
4 PsiBlast_PDB 56.9439% -10 - C1 -5UOR 5.9 M3K5_HUMAN