@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQZ7: (2017-11-30 )
MTDITLAPVQPDQPTHLMATYGRQAISFVRGRGAYLYTQDGTEYLDALTGIAVCGLGHTHPTIAEAIAEQAATLVHTSNLFEIPWQTAAAQKLAEVSGMEEIFFSNSGAESNEGAIKIARKFGTQQGISLPKIIVAEQSFHGRTLATLSATGNKKVQDGFAPLVEGFIRVPFGDIEAIQEAALQHPDIVAILIEPIQGEGGINTAPQGFSYLEEVRQICNQHNWLMMLDEIQTGNGRTGKYFAYQHTNIIPDVLTTAKGLGNGFPVGAVMTQGKAVGLLGPGSHGSTYGGTVLGSRVVYTVIDTIQKENAVENAAVVGNYIVDQLRAQLSDKNVQVRGFGMMIGIQLPKDCAELVAIARDEYKLIINVTAGSVVRLLPPINMTQAQADILLECLVALITNYL

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P00_A_13(4JEZ)
ARGD_SALTY
[Raw transfer]



P00_A_3(4JEW)
ARGD_SALTY
[Raw transfer]



P00_B_26(4JEX)
ARGD_SALTY
[Raw transfer]



P00_A_11(4JEX)
ARGD_SALTY
[Raw transfer]



PXG_B_6(4JEV)
ARGD_SALTY
[Raw transfer]



P00_B_19(4JEW)
ARGD_SALTY
[Raw transfer]



PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]



P00_B_18(4JEZ)
ARGD_SALTY
[Raw transfer]



PLP_A_3(2PB2)
ARGD_SALTY
[Raw transfer]



POI_C_3(1WKG)
LYSJ_THET8
[Raw transfer]



PXG_A_3(4JEV)
ARGD_SALTY
[Raw transfer]



5JV_B_9(5E5I)
?
[Raw transfer]



PPE_D_4(1WKH)
LYSJ_THET8
[Raw transfer]



5JV_A_3(5E3K)
?
[Raw transfer]



POI_D_4(1WKG)
LYSJ_THET8
[Raw transfer]



PLP_A_3(2ORD)
ARGD_THEMA
[Raw transfer]



PLP_A_3(4JEY)
ARGD_SALTY
[Raw transfer]



PPE_C_3(1WKH)
LYSJ_THET8
[Raw transfer]



PLP_B_9(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_A_4(2E54)
ARGD_THEMA
[Raw transfer]



PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]



PFM_C_7(2OAT)
OAT_HUMAN
[Raw transfer]



PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_B_13(4JEY)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4ZWM)
?
[Raw transfer]



5NJ_A_3(5E5I)
?
[Raw transfer]



PLP_B_6(2BYJ)
OAT_HUMAN
[Raw transfer]



PLP_A_5(2BYJ)
OAT_HUMAN
[Raw transfer]



PLP_B_6(4PPM)
PIGE_SERSF
[Raw transfer]



PLP_B_4(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_B_4(1VEF)
LYSJ_THET8
[Raw transfer]



PLP_A_3(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_A_4(4PPM)
PIGE_SERSF
[Raw transfer]



PLP_B_6(4PPM)
PIGE_SERSF
[Raw transfer]



PLP_A_3(2EO5)
?
[Raw transfer]



PLP_A_3(1VEF)
LYSJ_THET8
[Raw transfer]



PLP_A_4(4PPM)
PIGE_SERSF
[Raw transfer]



PLP_B_4(2EH6)
ARGD_AQUAE
[Raw transfer]



PEG_A_6(5EQC)
?
[Raw transfer]



CIT_A_10(5VIU)
?
[Raw transfer]



EDO_A_7(4JEY)
ARGD_SALTY
[Raw transfer]



EDO_B_7(2PB0)
ARGD_SALTY
[Raw transfer]
2 PsiBlast_PDB 88.5342% -75 - C1 -2E54 4.6 ARGD_THEMA
3 PsiBlast_PDB 87.1241% -75 - C1 -2ORD 4.8 ARGD_THEMA
21 PsiBlast_CBE 83.3243% -25 - C1 -2EH6 2.7 ARGD_AQUAE
8 PsiBlast_PDB 82.2037% -66 - C1 -3NX3 - ARGD_CAMJE -
1 PsiBlast_PDB 81.3543% -23 - C1 -2EH6 - ARGD_AQUAE -
23 PsiBlast_CBE 78.6037% -34 - C1 -4ADD - ASTC_ECOLI -
5 PsiBlast_PDB 78.4137% -33 - C1 -4ADC - ASTC_ECOLI -
6 PsiBlast_PDB 78.3837% -34 - C1 -4ADD - ASTC_ECOLI -
25 PsiBlast_CBE 77.3537% -35 - C1 -4ADC - ASTC_ECOLI -
26 PsiBlast_CBE 77.1737% -35 - C1 -4ADC - ASTC_ECOLI -
28 PsiBlast_CBE 77.0837% -37 - C1 -4ADB - ASTC_ECOLI -
24 PsiBlast_CBE 76.9037% -33 - C1 -4ADD - ASTC_ECOLI -
4 PsiBlast_PDB 76.8937% -34 - C1 -4ADB - ASTC_ECOLI -
29 PsiBlast_CBE 76.6237% -33 - C1 -4ADB - ASTC_ECOLI -
22 PsiBlast_CBE 76.1637% -33 - C1 -4ADD - ASTC_ECOLI -
102 HHSearch 76.0834% -30 - C1 -4JEV 6.1 ARGD_SALTY
27 PsiBlast_CBE 75.9737% -35 - C1 -4ADC - ASTC_ECOLI -
30 PsiBlast_CBE 74.9837% -35 - C1 -4ADB - ASTC_ECOLI -
7 PsiBlast_PDB 73.1337% -31 - C1 -4ADE - ASTC_ECOLI -
47 PsiBlast_CBE 72.8834% -21 - C1 -2BYJ 3.1 OAT_HUMAN
48 PsiBlast_CBE 71.8834% -20 - C1 -2BYJ 2.8 OAT_HUMAN
98 HHSearch 70.3233% -30 - C1 -4JF1 4.4 ARGD_SALTY
20 PsiBlast_PDB 69.8834% -10 - C1 -5VIU 1.2 ?
13 PsiBlast_PDB 69.0437% -32 - C1 -4JEV 5.1 ARGD_SALTY
37 PsiBlast_CBE 66.9337% -29 - C1 -2PB0 3.4 ARGD_SALTY
16 PsiBlast_PDB 66.8937% -36 - C1 -2PB2 4.4 ARGD_SALTY
34 PsiBlast_CBE 66.6937% -29 - C1 -4JEW 5.5 ARGD_SALTY
12 PsiBlast_PDB 66.5637% -33 - C1 -4JEW 6.5 ARGD_SALTY
38 PsiBlast_CBE 66.5137% -29 - C1 -4JF1 4.2 ARGD_SALTY
19 PsiBlast_PDB 66.3437% -33 - C1 -4JEY 4.4 ARGD_SALTY
18 PsiBlast_PDB 66.3237% -32 - C1 -4JEZ 3.5 ARGD_SALTY
75 PsiBlast_CBE 66.2731% -21 - C1 -4ZWM 4.4 ?
40 PsiBlast_CBE 66.1337% -29 - C1 -4JEY 4.4 ARGD_SALTY
15 PsiBlast_PDB 65.3637% -34 - C1 -2PB0 3.0 ARGD_SALTY
39 PsiBlast_CBE 65.2737% -32 - C1 -4JEZ 2.8 ARGD_SALTY
14 PsiBlast_PDB 64.4337% -32 - C1 -4JEX 3.5 ARGD_SALTY
17 PsiBlast_PDB 64.3037% -31 - C1 -4JF1 4.4 ARGD_SALTY
35 PsiBlast_CBE 64.1437% -31 - C1 -4JEX 5.5 ARGD_SALTY
10 PsiBlast_PDB 61.6133% 9 - C1 -1WKG 6.1 LYSJ_THET8
33 PsiBlast_CBE 60.7533% 11 - C1 -1VEF 2.8 LYSJ_THET8
9 PsiBlast_PDB 60.7133% 11 - C1 -1VEF 2.7 LYSJ_THET8
11 PsiBlast_PDB 60.4733% 10 - C1 -1WKH 6.1 LYSJ_THET8
32 PsiBlast_CBE 60.1933% 9 - C1 -1WKG 5.8 LYSJ_THET8
108 HHSearch 59.1734% -4 - C1 -4PPM 3.9 PIGE_SERSF
31 PsiBlast_CBE 59.1533% 10 - C1 -1WKH 6.8 LYSJ_THET8
109 HHSearch 58.9834% -2 - C1 -4PPM 2.2 PIGE_SERSF
89 PsiBlast_CBE 48.8533% 6 - C1 -4PPM 2.2 PIGE_SERSF
90 PsiBlast_CBE 48.6431% -8 - C1 -2EO5 4.4 ?
88 PsiBlast_CBE 46.8433% 7 - C1 -4PPM 3.9 PIGE_SERSF