@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ24_V3_1410: (2017-09-12 )
MSTPEQLPALSAAGSPSSGGASSHHSPHEASLSFPASVIPGDASAESPRAWSMPRSSTASEESAATSQLQQKPDAPESRLGGRKVVYFVDHSVTSIAYAEGHLMRPSRVRALHALVHSLGLDNAECMTVCHARPATAEEMGAFHRSAYLECLRQAPVICGNPLDEMSLAFQKEFDVPFASQNGDCPLFPEVWALVSSQAGASLACAEALVRGDATVAMNWAGGMHHAAAAHASGFCFVNDIVLCIRRLLRHYQRVLYVDLDVHHGDGVEGAFYGNHRVMTLSLHQFGNGFFPGTGDYPTRETADSFAINVPLPTRTGDAAYLLSFRTALSSVVQCFDPEAMVVQCGADTIAGDLIGRLCVTTLAHTQCVADVLSLERPTVLLGGGGYHVFHTARCWAIHTATALGRTAAQLPLYIPRTDPYYMDYRRECTPKRPTLHVFLDPDVDDPLPLGDSLAFWRQLCRSIQWQMRAARLVRQGFFRTLQLCRQRRAALLRQFATQEAGRESGIGVSGPKRPRSANATDRDAKEGVEDRVVSA

Atome Classification :

(96 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

V5X_B_10(2V5X)
HDAC8_HUMAN
[Raw transfer]




B3N_B_8(5DC5)
HDAC8_HUMAN
[Raw transfer]




V5X_A_6(2V5X)
HDAC8_HUMAN
[Raw transfer]




NHB_A_6(1W22)
HDAC8_HUMAN
[Raw transfer]




TSN_B_15(1T64)
HDAC8_HUMAN
[Raw transfer]




TSN_C_17(3F0R)
HDAC8_HUMAN
[Raw transfer]




B3N_A_4(5DC5)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3F06)
HDAC8_HUMAN
[Raw transfer]




NHB_B_10(1W22)
HDAC8_HUMAN
[Raw transfer]




TSN_B_12(3F0R)
HDAC8_HUMAN
[Raw transfer]




TSN_A_6(5D1B)
HDAC8_HUMAN
[Raw transfer]




SHH_A_6(4QA0)
HDAC8_HUMAN
[Raw transfer]




TSN_B_10(5D1B)
HDAC8_HUMAN
[Raw transfer]




TSN_B_15(1T64)
HDAC8_HUMAN
[Raw transfer]




SHH_B_10(4QA0)
HDAC8_HUMAN
[Raw transfer]




SHH_B_10(4QA2)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(5THS)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3EZP)
HDAC8_HUMAN
[Raw transfer]




B3N_B_17(5THS)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3EZT)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3MZ3)
HDAC8_HUMAN
[Raw transfer]




TSN_A_3(4QA3)
HDAC8_HUMAN
[Raw transfer]




TSN_B_12(4QA3)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3EZP)
HDAC8_HUMAN
[Raw transfer]




B3N_B_10(3MZ3)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(5THU)
HDAC8_HUMAN
[Raw transfer]




B3N_B_10(5THU)
HDAC8_HUMAN
[Raw transfer]




N4R_A_10(5G0J)
?
[Raw transfer]




B3N_A_5(3MZ7)
HDAC8_HUMAN
[Raw transfer]




5YA_B_7(5FCW)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3MZ4)
HDAC8_HUMAN
[Raw transfer]




B3N_A_5(3MZ6)
HDAC8_HUMAN
[Raw transfer]




B3N_A_5(3EW8)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(3F06)
HDAC8_HUMAN
[Raw transfer]




B3N_B_11(3EZT)
HDAC8_HUMAN
[Raw transfer]




B3N_A_6(5THV)
HDAC8_HUMAN
[Raw transfer]




B3N_B_24(5THV)
HDAC8_HUMAN
[Raw transfer]




AGE_B_12(3F07)
HDAC8_HUMAN
[Raw transfer]




GOL_A_7(5DC7)
HDAC8_HUMAN
[Raw transfer]




GOL_D_12(5DC7)
HDAC8_HUMAN
[Raw transfer]




GOL_D_14(4QA6)
HDAC8_HUMAN
[Raw transfer]




GOL_D_11(5DC6)
HDAC8_HUMAN
[Raw transfer]




GOL_A_7(5DC6)
HDAC8_HUMAN
[Raw transfer]




GOL_B_11(5D1C)
HDAC8_HUMAN
[Raw transfer]




GOL_C_12(5DC8)
HDAC8_HUMAN
[Raw transfer]




IWX_A_6(5IWG)
HDAC2_HUMAN
[Raw transfer]




GOL_C_12(5DC8)
HDAC8_HUMAN
[Raw transfer]




SHH_A_16(3C0Z)
HDAC7_HUMAN
[Raw transfer]




20Y_B_18(4LY1)
HDAC2_HUMAN
[Raw transfer]




SHH_C_18(3C0Z)

[Raw transfer]




TSN_C_18(3C10)

[Raw transfer]




TSN_A_16(3C10)
HDAC7_HUMAN
[Raw transfer]




TSN_B_17(3C10)
HDAC7_HUMAN
[Raw transfer]




SHH_B_17(3C0Z)
HDAC7_HUMAN
[Raw transfer]




NU9_A_8(3ZNR)
HDAC7_HUMAN
[Raw transfer]




NU7_A_8(3ZNS)
HDAC7_HUMAN
[Raw transfer]




CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_D_4(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]

-

NU7_B_13(3ZNS)
HDAC7_HUMAN
[Raw transfer]




B3N_A_6(3MZ4)
HDAC8_HUMAN
[Raw transfer]




NU7_C_18(3ZNS)

[Raw transfer]




CHAIN_D_4(3RQD)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(3RQD)
HDAC8_HUMAN
[Raw transfer]

-

MCM_C_12(4QA6)
HDAC8_HUMAN
[Raw transfer]




5YA_B_10(5FCW)
HDAC8_HUMAN
[Raw transfer]




MCM_D_13(4QA6)
HDAC8_HUMAN
[Raw transfer]




L6G_B_9(4RN0)
HDAC8_HUMAN
[Raw transfer]




L6G_A_3(4RN0)
HDAC8_HUMAN
[Raw transfer]




L8G_B_12(4RN1)
HDAC8_HUMAN
[Raw transfer]




L8G_A_6(4RN1)
HDAC8_HUMAN
[Raw transfer]




L7G_B_10(4RN2)
HDAC8_HUMAN
[Raw transfer]




L7G_A_6(4RN2)
HDAC8_HUMAN
[Raw transfer]




CHAIN_L_8(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_I_5(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_K_7(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

IMD_A_7(4RN0)
HDAC8_HUMAN
[Raw transfer]




IMD_A_7(4RN1)
HDAC8_HUMAN
[Raw transfer]




CHAIN_J_6(3EWF)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_B_2(4QA7)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_C_3(4QA6)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_I_4(2V5W)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_L_5(2V5W)
HDAC8_HUMAN
[Raw transfer]

-

CHAIN_D_4(4QA6)
HDAC8_HUMAN
[Raw transfer]

-

5 PsiBlast_PDB 92.5440%-112 - C2 -4LXZ - HDAC2_HUMAN -
31 PsiBlast_CBE 92.4136% -87 - C2 -4A69 - HDAC3_HUMAN -
8 PsiBlast_PDB 92.3536% -89 - C2 -4A69 - HDAC3_HUMAN -
4 PsiBlast_PDB 91.8740%-109 - C2 -5IX0 - HDAC2_HUMAN -
3 PsiBlast_PDB 91.7640%-111 - C2 -5IWG - HDAC2_HUMAN -
6 PsiBlast_PDB 91.6440%-111 - C2 -4LY1 - HDAC2_HUMAN -
24 PsiBlast_CBE 91.1340%-113 - C2 -5IX0 - HDAC2_HUMAN -
25 PsiBlast_CBE 90.9340%-113 - C2 -4LY1 - HDAC2_HUMAN -
23 PsiBlast_CBE 90.6940%-114 - C2 -5IX0 - HDAC2_HUMAN -
28 PsiBlast_CBE 90.6840%-111 - C2 -4LXZ - HDAC2_HUMAN -
27 PsiBlast_CBE 90.5340%-113 - C2 -4LXZ - HDAC2_HUMAN -
22 PsiBlast_CBE 90.5340%-111 - C2 -5IWG - HDAC2_HUMAN -
7 PsiBlast_PDB 90.4940%-111 - C2 -3MAX - HDAC2_HUMAN -
29 PsiBlast_CBE 90.4640%-113 - C2 -3MAX - HDAC2_HUMAN -
21 PsiBlast_CBE 90.4040%-113 - C2 -5IWG - HDAC2_HUMAN -
26 PsiBlast_CBE 90.3640%-110 - C2 -4LY1 - HDAC2_HUMAN -
2 PsiBlast_PDB 89.5240%-111 - C2 -5ICN - HDAC1_HUMAN -
30 PsiBlast_CBE 89.2640%-113 - C2 -3MAX - HDAC2_HUMAN -
148 HHSearch 89.1037% -89 - C2 -5IWG 6.3 HDAC2_HUMAN
1 PsiBlast_PDB 88.4240%-113 - C2 -4BKX - HDAC1_HUMAN -
149 HHSearch 87.2037% -86 - C2 -4LY1 7.8 HDAC2_HUMAN
171 Fugue 82.7436% -80 - C2 -4QA5 4.5 HDAC8_HUMAN
46 PsiBlast_CBE 82.4334% -58 - C2 -2V5X 6.0 HDAC8_HUMAN
151 HHSearch 81.3236% -84 - C2 -1T64 5.2 HDAC8_HUMAN
96 PsiBlast_CBE 81.0034% -56 - C2 -3EWF 5.0 HDAC8_HUMAN
150 HHSearch 80.9435% -87 - C2 -5DC8 2.7 HDAC8_HUMAN
32 PsiBlast_CBE 80.8434% -52 - C2 -4QA2 4.2 HDAC8_HUMAN
84 PsiBlast_CBE 80.7434% -57 - C2 -5D1B 4.6 HDAC8_HUMAN
105 PsiBlast_CBE 80.0134% -56 - C2 -5DC7 2.8 HDAC8_HUMAN
70 PsiBlast_CBE 79.9634% -58 - C2 -4QA3 4.7 HDAC8_HUMAN
93 PsiBlast_CBE 79.9234% -56 - C2 -3EWF 4.7 HDAC8_HUMAN
50 PsiBlast_CBE 79.9234% -69 - C2 -4RN1 3.8 HDAC8_HUMAN
68 PsiBlast_CBE 79.6734% -55 - C2 -5DC5 5.1 HDAC8_HUMAN
83 PsiBlast_CBE 79.6334% -55 - C2 -5D1B 4.4 HDAC8_HUMAN
94 PsiBlast_CBE 79.5634% -55 - C2 -3EWF 5.2 HDAC8_HUMAN
51 PsiBlast_CBE 79.4034% -58 - C2 -4RN1 3.1 HDAC8_HUMAN
107 PsiBlast_CBE 79.3834% -56 - C2 -5DC8 2.7 HDAC8_HUMAN
104 PsiBlast_CBE 79.3634% -57 - C2 -5DC7 2.7 HDAC8_HUMAN
67 PsiBlast_CBE 79.3334% -72 - C2 -5DC5 5.0 HDAC8_HUMAN
52 PsiBlast_CBE 79.1534% -72 - C2 -4RN0 3.5 HDAC8_HUMAN
54 PsiBlast_CBE 79.0634% -53 - C2 -4QA6 4.3 HDAC8_HUMAN
49 PsiBlast_CBE 79.0234% -68 - C2 -4RN2 3.5 HDAC8_HUMAN
95 PsiBlast_CBE 79.0034% -54 - C2 -3EWF 4.7 HDAC8_HUMAN
88 PsiBlast_CBE 78.9734% -56 - C2 -5DC6 2.7 HDAC8_HUMAN
103 PsiBlast_CBE 78.7834% -54 - C2 -4QA0 3.7 HDAC8_HUMAN
53 PsiBlast_CBE 78.7734% -58 - C2 -4RN0 3.9 HDAC8_HUMAN
38 PsiBlast_CBE 78.7334% -63 - C2 -1W22 4.1 HDAC8_HUMAN
47 PsiBlast_CBE 78.7034% -53 - C2 -2V5X 7.1 HDAC8_HUMAN
55 PsiBlast_CBE 78.6834% -57 - C2 -4QA6 4.4 HDAC8_HUMAN
73 PsiBlast_CBE 78.6634% -73 - C2 -5THV 4.0 HDAC8_HUMAN
69 PsiBlast_CBE 78.5434% -60 - C2 -4QA3 4.6 HDAC8_HUMAN
33 PsiBlast_CBE 78.5034% -56 - C2 -3F0R 4.3 HDAC8_HUMAN
42 PsiBlast_CBE 78.4734% -56 - C2 -3RQD 4.4 HDAC8_HUMAN
81 PsiBlast_CBE 78.4534% -72 - C2 -5THS 4.0 HDAC8_HUMAN
82 PsiBlast_CBE 78.4334% -55 - C2 -5THS 3.8 HDAC8_HUMAN
37 PsiBlast_CBE 78.4334% -61 - C2 -5FCW 4.5 HDAC8_HUMAN
102 PsiBlast_CBE 78.2934% -55 * C2 *4QA0 4.7 HDAC8_HUMAN
48 PsiBlast_CBE 78.2734% -57 - C2 -4RN2 3.1 HDAC8_HUMAN
39 PsiBlast_CBE 78.2334% -60 - C2 -1W22 4.7 HDAC8_HUMAN
86 PsiBlast_CBE 78.2134% -53 - C2 -4QA5 4.5 HDAC8_HUMAN
85 PsiBlast_CBE 77.9934% -52 - C2 -4QA5 4.9 HDAC8_HUMAN
41 PsiBlast_CBE 77.8834% -56 - C2 -1T64 5.0 HDAC8_HUMAN
58 PsiBlast_CBE 77.8334% -57 - C2 -4QA7 4.4 HDAC8_HUMAN
56 PsiBlast_CBE 77.7634% -52 - C2 -2V5W 6.3 HDAC8_HUMAN
34 PsiBlast_CBE 77.7634% -53 - C2 -3F0R 4.4 HDAC8_HUMAN
71 PsiBlast_CBE 77.7334% -56 - C2 -5D1C 2.7 HDAC8_HUMAN
87 PsiBlast_CBE 77.5934% -55 - C2 -5DC6 2.7 HDAC8_HUMAN
76 PsiBlast_CBE 77.4534% -57 - C2 -5THU 3.8 HDAC8_HUMAN
36 PsiBlast_CBE 77.4434% -52 - C2 -3F07 4.7 HDAC8_HUMAN
97 PsiBlast_CBE 77.3634% -56 - C2 -3EW8 2.9 HDAC8_HUMAN
66 PsiBlast_CBE 77.3134% -60 - C2 -3EZP 3.9 HDAC8_HUMAN
74 PsiBlast_CBE 77.1634% -71 - C2 -5THV 3.9 HDAC8_HUMAN
100 PsiBlast_CBE 77.1434% -59 - C2 -3MZ4 2.4 HDAC8_HUMAN
99 PsiBlast_CBE 77.0634% -59 - C2 -3MZ6 3.0 HDAC8_HUMAN
43 PsiBlast_CBE 76.8534% -58 - C2 -3RQD 4.5 HDAC8_HUMAN
91 PsiBlast_CBE 76.7834% -57 - C2 -3F06 3.7 HDAC8_HUMAN
63 PsiBlast_CBE 76.6634% -56 - C2 -3EZT 3.7 HDAC8_HUMAN
92 PsiBlast_CBE 76.4634% -58 - C2 -3F06 3.7 HDAC8_HUMAN
65 PsiBlast_CBE 76.4234% -57 - C2 -3EZP 3.8 HDAC8_HUMAN
57 PsiBlast_CBE 75.9334% -51 - C2 -2V5W 6.4 HDAC8_HUMAN
45 PsiBlast_CBE 75.8334% -57 - C2 -3MZ3 4.4 HDAC8_HUMAN
64 PsiBlast_CBE 75.7934% -56 - C2 -3EZT 3.1 HDAC8_HUMAN
101 PsiBlast_CBE 75.6634% -58 - C2 -3MZ4 3.3 HDAC8_HUMAN
98 PsiBlast_CBE 75.5934% -60 - C2 -3MZ7 3.8 HDAC8_HUMAN
75 PsiBlast_CBE 75.5034% -70 - C2 -5THU 3.3 HDAC8_HUMAN
44 PsiBlast_CBE 75.2134% -56 - C2 -3MZ3 4.0 HDAC8_HUMAN
137 PsiBlast_CBE 28.1035% -33 - C2 -3C10 3.5
136 PsiBlast_CBE 28.1035% -31 - C2 -3ZNR 4.7 HDAC7_HUMAN
140 PsiBlast_CBE 27.5535% -34 - C2 -3C0Z 2.7
133 PsiBlast_CBE 27.4635% -32 - C2 -3ZNS 4.5 HDAC7_HUMAN
131 PsiBlast_CBE 27.3835% -35 - C2 -3ZNS 4.5
138 PsiBlast_CBE 27.2735% -36 - C2 -3C10 3.6 HDAC7_HUMAN
142 PsiBlast_CBE 27.2435% -41 - C2 -3C0Z 3.0 HDAC7_HUMAN
132 PsiBlast_CBE 26.4335% -40 - C2 -3ZNS 4.2 HDAC7_HUMAN
141 PsiBlast_CBE 26.2835% -34 - C2 -3C0Z 2.9 HDAC7_HUMAN
139 PsiBlast_CBE 25.9435% -40 - C2 -3C10 3.5 HDAC7_HUMAN