@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0046: (2017-12-14 )
MMDKRIFVEKKADFQVKSESLVRELQHNLGLSSLKSIRIVQVYDVFDLAEDLFAPAEKHIFSEQGTDHVLDEVSVQADLANYAFFAIESLPGQFDQRAASSQEALLLLGSSSDVTVNTAQLYLVNKDIDATELEAVKNYLLNPVDSRFKDITTGIAKQEFSESDKTIPKLTFFESYTAEDFARYKAEQGMAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKHIDFSASKFQKQLQSTYDKYIAMREELGRSEKPQTLMDMATIFGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRISGAGDITAPISETRAGKLPQQVISKTAAHGYSSYGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKGNVVREKPEAGDVIILLGGKTGRDGVGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGNVTRLIKKSNDFGAGGVCVAIGELADGLEIDLNKVPLKYQGLNGTEIAISESQERMAVVVRPEDVDTFVAECNKENIDAVVVATVTEKPNLVMHWNGETIVDLERRFLDINGVRVVVDAKVVDKDVKLPEERQTSAETLESDTLTVLSDLNHASQKGLQTIFDCSVGRSTVNHPLGGRYQLTPTEASVQKLPVQHGVTHTASVIAQGFNPYVAEWSPYHGAAYAVIEATARLVAAGANWSKARFSYQEYFERMDKQAERFGQPVAALLGSIEAQIQLGLPSIGGKDSMSGTFEELTVPPTLVAFGVTTADSRKVLSPEFKAVGENIYYIPGQALSAEIDFDLIKKNFAQFEASQADHKVTSASAVKYGGVVESLALATFGNYIGAEVTLPELKTALTAQLGGFVFTSPEEIAGVEKIGQTKADFTLTVNGVKLDGHKLDSAFQGTLEEVYPTEFTQAKELEEVPAVASDVVIKAKEKVEKPVVYIPVFPGTNSEYDSAKAFEKEGAEVNLVPFVTLNEEAIVKSVETMVDNIDKTNILFFAGGFSAADEPDGSAKFIVNILLNEKVRVAIDSFIARGGLIIGICNGFQALVKSGLLPYGNFEDANNTSPTLFYNDANQHVAKMVETRIANTNSPWLAGVQVGDIHAIPVSHGEGKFVVTAEEFAELRDNGQIFSQYVDFNGKPSMDSKYNPNGSVHAIEGITSKNGQIIGKMGHSERYEDGLFQNIPGNKDQHLFASAVKHFTGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FGR_A_3(2HS3)
PURL_THEMA
[Raw transfer]




FGR_A_7(2HS4)
PURL_THEMA
[Raw transfer]




1 PsiBlast_PDB 72.2524% 25 - C5 -3UGJ - PUR4_SALTY -
14 HHSearch 53.0924% 24 - C5 -2HS3 - PURL_THEMA -
2 PsiBlast_PDB 50.7926% 16 - C5 -3VIU - PURL_THET8 -
7 PsiBlast_PDB 49.8225% 20 - C5 -2HRY - PURL_THEMA -
4 PsiBlast_PDB 49.1725% 21 - C5 -2HS3 4.3 PURL_THEMA
6 PsiBlast_PDB 48.1525% 19 - C5 -2HRU - PURL_THEMA -
3 PsiBlast_PDB 47.7125% 20 - C5 -2HS0 - PURL_THEMA -
5 PsiBlast_PDB 47.6825% 20 - C5 -2HS4 4.2 PURL_THEMA
32 HHSearch 42.3116% -28 - C5 -2HS3 - PURL_THEMA -
42 Fugue 37.8617% 29 - C4 -5IJL - DP2L_PYRAB -
46 Fugue 35.0218% 43 - C4 -4W8J - CR1AC_BACTK -
26 HHSearch 33.4516% -20 - C5 -2YYE - SELD_AQUAE -
43 Fugue 32.9615% 5 - C4 -4MT1 - ? -
21 HHSearch 32.0716% -3 - C5 -5CM7 - ? -
44 Fugue 31.6714% -5 - C4 -1L5J - ACNB_ECOLI -
28 HHSearch 31.6513% -4 - C5 -3WJP - ? -
8 PsiBlast_PDB 31.6036%-137 - C3 -3OPY - PFKA1_PICPA -
24 HHSearch 31.3811% -17 - C5 -5VK4 - ? -
35 HHSearch 31.3715% -30 - C5 -3U0O - SELD_ECOLI -
22 HHSearch 30.2313% -38 - C5 -3FD5 - SPS1_HUMAN -