@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0381: (2017-12-21 )
MKLEHKNIFITGSSRGIGLAIAHKFAQAGANIVLNSRGAISEELLAEFSNYGIKVVPISGDVSDFADAKRMIDQAIAELGSVDVLVNNAGITQDTLMLKMTEADFEKVLKVNLTGAFNMTQSVLKPMMKAREGAIINMSSVVGLMGNIGQANYAASKAGLIGFTKSVAREVASRNIRVNVIAPGMIESDMTAILSDKIKEATLAQIPMKEFGQAEQVADLTVFLAGQDYLTGQVIAIDGGLSM

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_A_5(4NBU)
?
[Raw transfer]



NAP_E_5(1EDO)
FABG1_BRANA
[Raw transfer]



NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]



NAP_A_13(1Q7B)
FABG_ECOLI
[Raw transfer]



NAI_C_8(4NBU)
?
[Raw transfer]



NDP_B_6(3SJ7)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



CAA_B_7(4NBU)
?
[Raw transfer]



1PE_B_5(2PNF)
FABG_AQUAE
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



PEG_A_6(3OSU)
FABG_STAAM
[Raw transfer]



1PE_A_6(2PNF)
FABG_AQUAE
[Raw transfer]



EDO_B_21(3RRO)
FABG_VIBCH
[Raw transfer]



PEG_A_3(3OSU)
FABG_STAAM
[Raw transfer]



PG4_A_4(3SJ7)
?
[Raw transfer]



PG4_B_7(3SJ7)
?
[Raw transfer]



PGE_A_8(3RRO)
FABG_VIBCH
[Raw transfer]



PGE_B_24(3RRO)
FABG_VIBCH
[Raw transfer]
24 PsiBlast_CBE 81.7148% -16 - C1 -4JRO - ? -
23 PsiBlast_CBE 81.6548% -11 - C1 -4JRO - ? -
22 PsiBlast_CBE 81.3746% -16 - C1 -2PNF 1.5 FABG_AQUAE
49 PsiBlast_CBE 81.1143% -96 * C1 *4NBU - ? -
51 PsiBlast_CBE 80.7643% -96 - C1 -4NBU 4.9 ?
2 PsiBlast_PDB 80.3750% -18 - C1 -1EDO 12.6 FABG1_BRANA
50 PsiBlast_CBE 80.2143% -96 - C1 -4NBU 11.9 ?
6 PsiBlast_PDB 80.1146% -20 - C1 -2P68 - FABG_AQUAE -
52 PsiBlast_CBE 79.9043% -98 - C1 -4NBU 11.8 ?
5 PsiBlast_PDB 79.5846% -15 - C1 -2PNF 1.7 FABG_AQUAE
7 PsiBlast_PDB 79.5048% -15 - C1 -4JRO - ? -
39 PsiBlast_CBE 78.5545% -37 - C1 -4I08 9.0 FABG_VIBCH
12 PsiBlast_PDB 78.5245% -45 - C1 -1Q7B 7.2 FABG_ECOLI
26 PsiBlast_CBE 78.2645% -44 - C1 -1Q7B - FABG_ECOLI -
21 PsiBlast_CBE 78.0847% -1 - C1 -3SJ7 11.7 ?
27 PsiBlast_CBE 77.7945% -43 - C1 -1Q7B - FABG_ECOLI -
25 PsiBlast_CBE 77.5148% -13 - C1 -4JRO - ? -
3 PsiBlast_PDB 77.2050% - - C1 -2CDH - FABG1_BRANA -
18 PsiBlast_PDB 76.7645% -40 - C1 -1Q7C - FABG_ECOLI -
20 PsiBlast_PDB 76.7545% -33 - C1 -3TZK - ? -
41 PsiBlast_CBE 74.6445% -35 - C1 -3RRO 3.0 FABG_VIBCH
17 PsiBlast_PDB 74.4245% -35 - C1 -3RRO 2.9 FABG_VIBCH
9 PsiBlast_PDB 74.0146% 2 - C1 -3OSU 2.5 FABG_STAAM
4 PsiBlast_PDB 73.4147% 0 - C1 -3SJ7 1.9 ?