@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0745: (2017-12-28 )
MKLNKYIDHTLLKQDAKKKQIDSLLSEAREYGFASVCVNPTWVEHAKKGLEGTDVKVCTVVGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGNLALVESDIRAVVEASGDKLVKVIIEACLLTDQEKIVVCQLAQKAGADFVKTSTGFSTGGATIADVTLMRETVGSDMGVKAAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_7(3R13)
DEOC_THEMA
[Raw transfer]




HPD_B_6(1UB3)
DEOC_THET8
[Raw transfer]




HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]




HPD_D_8(1UB3)
DEOC_THET8
[Raw transfer]




HPD_D_8(1UB3)
DEOC_THET8
[Raw transfer]




HPD_C_7(1UB3)
DEOC_THET8
[Raw transfer]




GOL_B_12(3R13)
DEOC_THEMA
[Raw transfer]




CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]




CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]




UNL_B_7(3NG3)
DEOC_MYCA1
[Raw transfer]




ACY_B_3(4XBK)
?
[Raw transfer]




UNL_A_4(3NDO)
?
[Raw transfer]




UNL_C_9(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_D_12(3NG3)
DEOC_MYCA1
[Raw transfer]




HPD_A_3(1JCJ)
DEOC_ECOLI
[Raw transfer]




UNL_A_6(3NG3)
DEOC_MYCA1
[Raw transfer]




UNL_B_7(3NDO)
?
[Raw transfer]




HPD_B_4(1JCJ)
DEOC_ECOLI
[Raw transfer]




UNL_A_4(3NDO)
?
[Raw transfer]




BU2_A_2(5EKY)
DEOC_ECOLI
[Raw transfer]




ACY_B_3(5H91)
?
[Raw transfer]




1BO_A_2(5EL1)
DEOC_ECOLI
[Raw transfer]




1BO_A_2(5EMU)
DEOC_ECOLI
[Raw transfer]




UNL_A_5(5C5Y)
?
[Raw transfer]




UNL_C_10(5C5Y)
?
[Raw transfer]




UNL_D_11(5C5Y)
?
[Raw transfer]




UNL_A_3(5C2X)
?
[Raw transfer]




UNL_B_5(5C2X)
?
[Raw transfer]




UNL_B_8(5C5Y)
?
[Raw transfer]




UNL_D_11(5C5Y)
?
[Raw transfer]




UNL_C_10(5C5Y)
?
[Raw transfer]




ACY_B_4(4XBK)
?
[Raw transfer]




EDO_C_16(3NGJ)
?
[Raw transfer]




61 HHSearch 94.4074%-100 - C3 -5DBU - ? -
1 PsiBlast_PDB 93.2674% -93 - C3 -5DBU - ? -
64 HHSearch 91.6054% -99 * C3 *3R13 2.4 DEOC_THEMA
23 PsiBlast_CBE 90.4461%-114 - C3 -3NGJ - ? -
2 PsiBlast_PDB 90.3074% -96 - C3 -5DBT - ? -
65 HHSearch 90.2554% -99 - C3 -3R12 2.9 DEOC_THEMA
22 PsiBlast_CBE 89.4061%-108 - C3 -3NGJ - ? -
3 PsiBlast_PDB 88.8461%-109 - C3 -3NGJ - ? -
8 PsiBlast_PDB 88.6655%-100 - C3 -3R13 2.5 DEOC_THEMA
79 HHSearch 88.3660%-111 - C3 -3NGJ 2.8 ?
7 PsiBlast_PDB 88.0955%-101 - C3 -3R12 2.9 DEOC_THEMA
21 PsiBlast_CBE 87.4961%-111 - C3 -3NGJ - ? -
67 HHSearch 81.8647% -84 - C3 -3OA3 - ? -
6 PsiBlast_PDB 81.4553% -38 - C3 -4XBK - ? -
25 PsiBlast_CBE 80.6553% -39 - C3 -4XBK 3.4 ?
10 PsiBlast_PDB 80.5042% -96 - C3 -1J2W - DEOC_THET8 -
5 PsiBlast_PDB 80.0453% -39 - C3 -5H91 - ? -
29 PsiBlast_CBE 79.9942%-102 - C3 -1UB3 3.3 DEOC_THET8
24 PsiBlast_CBE 79.7953% -40 - C3 -5H91 3.6 ?
66 HHSearch 79.3247% -85 - C3 -3OA3 - ? -
80 HHSearch 78.0342%-100 - C3 -1UB3 4.1 DEOC_THET8
27 PsiBlast_CBE 78.0342%-100 - C3 -1UB3 4.1 DEOC_THET8
11 PsiBlast_PDB 78.0242% -95 - C3 -1UB3 3.8 DEOC_THET8
28 PsiBlast_CBE 77.9042%-100 - C3 -1UB3 4.0 DEOC_THET8
31 PsiBlast_CBE 77.3949% -70 - C3 -3NG3 3.2 DEOC_MYCA1
12 PsiBlast_PDB 76.1649% -65 - C3 -3NG3 2.9 DEOC_MYCA1
32 PsiBlast_CBE 75.4649% -65 - C3 -3NG3 2.8 DEOC_MYCA1
76 HHSearch 75.1443% -73 - C3 -3NDO 2.8 ?
30 PsiBlast_CBE 74.6549% -72 - C3 -3NG3 3.3 DEOC_MYCA1
13 PsiBlast_PDB 70.7843% -71 - C3 -3NDO 2.8 ?
33 PsiBlast_CBE 70.4643% -71 - C3 -3NDO 2.8 ?
45 PsiBlast_CBE 65.4031% -12 - C3 -5C5Y 3.2 ?
47 PsiBlast_CBE 64.4431% -12 - C3 -5C5Y 3.2 ?
50 PsiBlast_CBE 64.2631% -10 - C3 -5C2X 2.4 ?
49 PsiBlast_CBE 64.2431% -11 - C3 -5C2X 2.4 ?
48 PsiBlast_CBE 64.0531% -12 - C3 -5C5Y 3.0 ?
46 PsiBlast_CBE 63.8831% -15 - C3 -5C5Y 3.2 ?
41 PsiBlast_CBE 61.5734% 4 - C3 -1JCJ 3.3 DEOC_ECOLI
40 PsiBlast_CBE 61.4934% 5 - C3 -1JCJ 2.4 DEOC_ECOLI
44 PsiBlast_CBE 60.7534% 1 - C3 -5EKY 2.4 DEOC_ECOLI
42 PsiBlast_CBE 60.3834% 5 - C3 -5EMU 1.5 DEOC_ECOLI
68 HHSearch 58.4231% 2 - C3 -5C5Y 3.4 ?
69 HHSearch 57.0531% -1 - C3 -5C5Y 3.3 ?