@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1425: (2018-01-11 )
MAKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGENIQEQTEQVLKNIGAILAEAGTDFDHVVKTTCFLSDMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIEVIAEIG

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BGC_B_5(3K0T)
?
[Raw transfer]



BGC_A_4(3K0T)
?
[Raw transfer]



GOL_C_15(3VCZ)
?
[Raw transfer]



BGC_C_6(3K0T)
?
[Raw transfer]



GOL_A_6(3VCZ)
?
[Raw transfer]



GOL_B_11(3VCZ)
?
[Raw transfer]



GOL_C_15(3VCZ)
?
[Raw transfer]



PYR_B_5(5HP8)
RIDA_ARATH
[Raw transfer]



PYR_C_6(5HP8)
RIDA_ARATH
[Raw transfer]



ACY_A_7(5V4D)
?
[Raw transfer]



ACY_E_17(5V4D)
?
[Raw transfer]



ACY_D_15(5V4D)
?
[Raw transfer]



ACY_F_21(5V4D)
?
[Raw transfer]



ACY_B_10(5V4D)
?
[Raw transfer]



ACY_B_10(5V4D)
?
[Raw transfer]



BEZ_D_16(1ONI)
RIDA_HUMAN
[Raw transfer]



BEZ_I_22(1ONI)
RIDA_HUMAN
[Raw transfer]



BEZ_A_11(1ONI)
RIDA_HUMAN
[Raw transfer]



ACY_C_13(5V4D)
?
[Raw transfer]
72 HHSearch 91.8385% -67 * C5 *3L7Q - ? -
1 PsiBlast_PDB 91.5884% -67 - C5 -3L7Q - ? -
64 HHSearch 85.1855% -80 - C5 -2DYY - Y854_PYRHO -
53 Fugue 84.3654% -93 - C5 -1QD9 - RIDA_BACSU -
71 HHSearch 84.0852% -96 - C5 -2B33 - ? -
2 PsiBlast_PDB 83.8356% -87 - C5 -2DYY - Y854_PYRHO -
4 PsiBlast_PDB 82.3453%-100 - C5 -2B33 - ? -
83 HHSearch 81.9755%-105 - C5 -1QD9 - RIDA_BACSU -
23 PsiBlast_CBE 81.4853% -99 - C5 -2B33 - ? -
80 HHSearch 81.4147% -89 - C5 -1QAH - RIDA_RAT -
3 PsiBlast_PDB 81.2257% -95 - C5 -1QD9 - RIDA_BACSU -
21 PsiBlast_CBE 80.6857% -97 - C5 -1QD9 - RIDA_BACSU -
84 HHSearch 80.6650% -77 - C5 -3VCZ 2.0 ?
66 HHSearch 79.8154% -59 - C5 -1J7H - Y719_HAEIN -
70 HHSearch 79.7042% -89 - C5 -3K0T 3.0 ?
69 HHSearch 79.1842% -93 - C5 -3K0T 2.3 ?
22 PsiBlast_CBE 78.9457% -93 - C5 -1QD9 - RIDA_BACSU -
13 PsiBlast_PDB 78.2147% -93 - C5 -1QAH - RIDA_RAT -
75 HHSearch 78.1147% -91 - C5 -2CVL - ? -
79 HHSearch 78.0650% -39 - C5 -5V4D 3.1 ?
39 PsiBlast_CBE 76.5850% -37 - C5 -5V4D 3.1 ?
27 PsiBlast_CBE 76.1947% -90 - C5 -1ONI 3.7 RIDA_HUMAN
26 PsiBlast_CBE 75.8547% -90 - C5 -1ONI 4.1 RIDA_HUMAN
31 PsiBlast_CBE 75.7147% -89 - C5 -1ONI 2.7 RIDA_HUMAN
38 PsiBlast_CBE 75.4650% -32 - C5 -5V4D 3.2 ?
33 PsiBlast_CBE 75.3749% -79 - C5 -3VCZ 3.1 ?
37 PsiBlast_CBE 75.2050% -37 - C5 -5V4D 3.1 ?
10 PsiBlast_PDB 74.9350% -37 - C5 -5V4D 3.1 ?
32 PsiBlast_CBE 74.8049% -84 - C5 -3VCZ 3.1 ?
40 PsiBlast_CBE 74.5050% -39 - C5 -5V4D 3.2 ?
36 PsiBlast_CBE 73.6750% -39 - C5 -5V4D 3.1 ?
19 PsiBlast_PDB 72.4544% -92 - C5 -3K0T 2.1 ?