@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKN2: (2017-10-27 )
MSDLPQNDEYDRRFAGVAKIYGDSSFQHYEQSHVMVIGIGGVGSWAVEALARTGIGEITLVDMDVVAASNVNRQLPAMTSTLGCEKVEIMAERCRQINPRIKVNIIDDFLTPENVAELLNPVPDIVLDCIDDVKAKLALMLHCRFNKIPLIVSGGAGGKLDPLKIRVADLSKTEQDPMLAKLRSQLRARGICKKPKEKFGITCIYSIDNPFSSADVCPSAGLRCGGYGSAVVVTSSFAMIAVAEVLKKLDLKKA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4D79)
TCDA_ECOLI
[Raw transfer]



ATP_A_5(4RDI)
TCDA_ECOLI
[Raw transfer]



ATP_A_6(4D79)
TCDA_ECOLI
[Raw transfer]



ATP_A_6(4D79)
TCDA_ECOLI
[Raw transfer]



ATP_C_15(4D79)
TCDA_ECOLI
[Raw transfer]



ATP_D_20(4D79)
TCDA_ECOLI
[Raw transfer]



AMP_A_5(4YED)
TCDA_ECOLI
[Raw transfer]



ATP_B_11(4D79)
TCDA_ECOLI
[Raw transfer]



AMP_D_17(4D7A)
TCDA_ECOLI
[Raw transfer]



AMP_A_6(4D7A)
TCDA_ECOLI
[Raw transfer]



AMP_B_11(4D7A)
TCDA_ECOLI
[Raw transfer]



AMP_A_5(4RDH)
TCDA_ECOLI
[Raw transfer]
91 Fugue 91.6449%-128 - C1 -4D79 7.6 TCDA_ECOLI
1 PsiBlast_PDB 89.9446%-127 - C1 -4D79 7.6 TCDA_ECOLI
2 PsiBlast_PDB 89.8146%-127 - C1 -4D7A 6.6 TCDA_ECOLI
23 PsiBlast_CBE 89.4746%-123 - C1 -4D79 7.6 TCDA_ECOLI
22 PsiBlast_CBE 89.0046%-125 - C1 -4D79 6.7 TCDA_ECOLI
26 PsiBlast_CBE 88.6846%-125 - C1 -4D7A 6.4 TCDA_ECOLI
24 PsiBlast_CBE 88.6346%-123 - C1 -4D7A 6.7 TCDA_ECOLI
21 PsiBlast_CBE 88.2846%-123 - C1 -4D79 7.5 TCDA_ECOLI
25 PsiBlast_CBE 88.2746%-126 - C1 -4D7A - TCDA_ECOLI -
3 PsiBlast_PDB 86.5446%-125 - C1 -4YED 6.5 TCDA_ECOLI
4 PsiBlast_PDB 86.0446%-121 - C1 -4RDH 7.3 TCDA_ECOLI
5 PsiBlast_PDB 86.0246%-119 - C1 -4RDI 7.8 TCDA_ECOLI
69 HHSearch 82.8647% -77 - C1 -4D79 7.6 TCDA_ECOLI
10 PsiBlast_PDB 61.6533%-153 - C1 -1ZKM - THIF_ECOLI -
6 PsiBlast_PDB 60.8338%-163 - C1 -1JWB - MOEB_ECOLI -
31 PsiBlast_CBE 60.1433%-155 - C1 -1ZFN - THIF_ECOLI -
8 PsiBlast_PDB 59.8438%-161 - C1 -1JW9 - MOEB_ECOLI -
32 PsiBlast_CBE 59.4433%-159 - C1 -1ZFN - THIF_ECOLI -
9 PsiBlast_PDB 59.3833%-158 - C1 -1ZFN - THIF_ECOLI -
92 Fugue 57.7820%-148 - C1 -1Y8Q - SAE2_HUMAN -