@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKT7: (2017-10-29 )
MSKIEDVVKLGPVIPVLAFDSAEQGEHVSRALHAGGVKVLEITLRTAAGLAAIERASQLADDIVVGVGTITKPEHCAQAKKAGAKFGVSPGLTKDLHLAAQDAGLPLLPGVMTPSDLIQAIELGYDIVKFFPAQQAGGVEMLKAFYGPFPNLRFCPTGGITAETAPDFLKQPNVVCVGGSWLTPKPVVAAQDWAEITRLAQIASQL

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_D_4(1FQ0)
ALKH_ECOLI
[Raw transfer]



CIT_D_4(1FQ0)
ALKH_ECOLI
[Raw transfer]



CIT_F_6(1FQ0)
ALKH_ECOLI
[Raw transfer]



CIT_E_5(1FQ0)
ALKH_ECOLI
[Raw transfer]



CIT_E_5(1FQ0)
ALKH_ECOLI
[Raw transfer]



PYR_B_10(1EUA)
ALKH_ECOLI
[Raw transfer]



CIT_E_5(1FWR)
ALKH_ECOLI
[Raw transfer]



PYR_C_11(1EUA)
ALKH_ECOLI
[Raw transfer]



PYR_A_9(1EUA)
ALKH_ECOLI
[Raw transfer]



CIT_D_4(1FWR)
ALKH_ECOLI
[Raw transfer]



PYR_A_3(3VCR)
?
[Raw transfer]



CIT_F_6(1FWR)
ALKH_ECOLI
[Raw transfer]



PYR_C_15(1WA3)
?
[Raw transfer]



PYR_B_14(1WA3)
?
[Raw transfer]



PYR_F_18(1WA3)
?
[Raw transfer]



PYR_D_16(1WA3)
?
[Raw transfer]



PYR_B_14(1WA3)
?
[Raw transfer]



PYR_A_13(1WA3)
?
[Raw transfer]



PYR_E_17(1WA3)
?
[Raw transfer]



PYR_D_16(1WA3)
?
[Raw transfer]
60 HHSearch 95.8545%-161 - C1 -4BK9 - ? -
59 HHSearch 93.8845%-160 - C1 -4BK9 - ? -
58 HHSearch 92.6342%-161 - C1 -2C0A - ALKH_ECOLI -
52 HHSearch 92.3639%-159 * C1 *4E38 - ? -
57 HHSearch 91.8743%-165 - C1 -1FQ0 3.6 ALKH_ECOLI
51 HHSearch 91.4139%-154 - C1 -4E38 - ? -
55 HHSearch 91.3436%-160 - C- -1VHC - ALKH_HAEIN -
11 PsiBlast_PDB 90.5239%-158 - C1 -4E38 - ? -
53 HHSearch 89.8738%-156 - C1 -1MXS - ALKD_PSEPU -
54 HHSearch 89.2136%-161 - C- -1VHC - ALKH_HAEIN -
9 PsiBlast_PDB 87.1838%-158 - C1 -1MXS - ALKD_PSEPU -
1 PsiBlast_PDB 84.8445% -75 - C1 -4BK9 - ? -
13 PsiBlast_PDB 84.3038%-158 - C- -1VHC - ALKH_HAEIN -
5 PsiBlast_PDB 80.3243%-147 - C1 -1WAU - ALKH_ECOLI -
8 PsiBlast_PDB 79.9343% -63 - C1 -3VCR 2.5 ?
61 HHSearch 78.4338%-139 - C1 -2YW3 - ? -
68 Fugue 77.6641% -8 - C1 -1FQ0 3.7 ALKH_ECOLI
12 PsiBlast_PDB 76.8838% 0 - C- -5IM5 - ? -
15 PsiBlast_PDB 73.3542%-150 - C1 -2YW4 - ? -
14 PsiBlast_PDB 72.4942%-150 - C1 -2YW3 - ? -
63 HHSearch 70.2534% -54 - C1 -1WA3 2.7 ?
34 PsiBlast_CBE 69.3343% -7 - C1 -1FWR 2.2 ALKH_ECOLI
28 PsiBlast_CBE 69.3144% -10 - C1 -1EUA 3.3 ALKH_ECOLI
23 PsiBlast_CBE 68.5744% -10 - C1 -1FQ0 3.2 ALKH_ECOLI
10 PsiBlast_PDB 68.4243% -7 - C1 -1FWR 2.0 ALKH_ECOLI
33 PsiBlast_CBE 68.3843% -5 - C1 -1FWR 3.1 ALKH_ECOLI
24 PsiBlast_CBE 68.3144% -11 - C1 -1FQ0 3.4 ALKH_ECOLI
2 PsiBlast_PDB 68.1944% -9 - C1 -1FQ0 3.4 ALKH_ECOLI
27 PsiBlast_CBE 67.9644% -12 - C1 -1EUA 2.9 ALKH_ECOLI
3 PsiBlast_PDB 67.7844% -11 - C1 -1EUA 2.9 ALKH_ECOLI
42 PsiBlast_CBE 66.8135% -54 - C1 -1WA3 2.7 ?
62 HHSearch 66.7834% -58 - C1 -1WA3 2.7 ?
46 PsiBlast_CBE 66.1935% -52 - C1 -1WA3 2.7 ?
16 PsiBlast_PDB 65.4235% -50 - C1 -1WA3 2.9 ?
45 PsiBlast_CBE 65.4135% -55 - C1 -1WA3 3.0 ?
44 PsiBlast_CBE 64.2335% -53 - C1 -1WA3 2.7 ?
43 PsiBlast_CBE 63.9735% -49 - C1 -1WA3 2.9 ?