@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL42: (2017-10-31 )
MALLITSDCINCDMCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDCIKQDPAHIENKEQLLEKFKGLNLIGSFSS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_A_3(3EUN)
FER_ALLVD
[Raw transfer]




SF4_A_5(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_3(3EXY)
FER_ALLVD
[Raw transfer]




SF4_C_9(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_5(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_3(1BLU)
FER_ALLVD
[Raw transfer]




SF4_A_3(3EXY)
FER_ALLVD
[Raw transfer]




SF4_A_3(2FGO)
?
[Raw transfer]




SF4_A_3(3EUN)
FER_ALLVD
[Raw transfer]




SF4_B_7(2ZVS)
YFHL_ECOLI
[Raw transfer]




SF4_A_3(1RGV)
?
[Raw transfer]




1 PsiBlast_PDB 81.6258%-127 - C7 -2FGO 4.1 ?
2 PsiBlast_PDB 79.3563%-153 - C7 -2ZVS 3.9 YFHL_ECOLI
3 PsiBlast_PDB 79.2651%-133 - C7 -1BLU 4.1 FER_ALLVD
22 PsiBlast_CBE 78.5763%-132 - C7 -2ZVS 4.0 YFHL_ECOLI
5 PsiBlast_PDB 77.8750%-123 - C7 -3EUN 4.1 FER_ALLVD
4 PsiBlast_PDB 76.9951%-125 - C7 -3EXY 4.1 FER_ALLVD
21 PsiBlast_CBE 76.2863%-128 - C7 -2ZVS 4.0 YFHL_ECOLI
88 HHSearch 71.8059%-188 - C7 -3EXY 4.1 FER_ALLVD
6 PsiBlast_PDB 70.8150%-124 - C7 -1RGV 3.8 ?
91 HHSearch 69.7356%-195 - C7 -3EUN 4.0 FER_ALLVD
92 HHSearch 68.8659%-173 - C7 -2ZVS 4.0 YFHL_ECOLI
9 PsiBlast_PDB 63.5941%-255 - C7 -2FDN - FER_CLOA9 -
7 PsiBlast_PDB 63.5141%-264 - C7 -1FCA - FER_CLOA9 -
8 PsiBlast_PDB 62.9641%-259 - C7 -1FDN - FER_CLOA9 -
11 PsiBlast_PDB 62.3732% 7 - C7 -1BWE - FER_HYDSH -
10 PsiBlast_PDB 61.5332% 8 - C7 -1BQX - FER_HYDSH -
87 HHSearch 61.0354%-196 - C7 -1RGV - ? -
13 PsiBlast_PDB 60.6740%-276 - C7 -1DUR - FER_PEPAS -
15 PsiBlast_PDB 59.9530% 34 - C7 -1BD6 - FER_HYDSH -
14 PsiBlast_PDB 57.8431% 20 - C7 -1BC6 - FER_HYDSH -