@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLI6: (2017-11-02 )
MSLINTEVKPFQATAYHNGQFIEVNETNLKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLGVEIYGVSTDTHFTHKAWHDTSDAIKKIQYPLIGDPTWTLSKNFDVLIESEGLADRGTFVIDPEGKIQIVEINAGGIGRDASELLRKVKAAQYVHSHPGEVCPAKWKEGEATLAPSIDLVGKI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CPS_A_8(4XCS)
PRDX1_HUMAN
[Raw transfer]



COM_E_10(4RQX)
PRDX4_HUMAN
[Raw transfer]



CPS_D_10(4XCS)
PRDX1_HUMAN
[Raw transfer]



QDO_C_7(4KW6)
?
[Raw transfer]



GOL_C_8(3QPM)
?
[Raw transfer]



GOL_A_6(3QPM)
?
[Raw transfer]
39 PsiBlast_CBE 97.8871%-104 - C1 -4MA9 - AHPC_SALTY -
38 PsiBlast_CBE 96.8471%-101 - C1 -4MA9 - AHPC_SALTY -
218 HHSearch 96.5171% -98 - C1 -1N8J - AHPC_SALTY -
89 PsiBlast_CBE 96.5170%-100 - C1 -4MAB - AHPC_SALTY -
219 HHSearch 96.3671%-101 - C1 -4XRA - AHPC_SALTY -
40 PsiBlast_CBE 96.3371%-100 - C1 -4MA9 - AHPC_SALTY -
16 PsiBlast_PDB 95.2670% -97 - C1 -1N8J - AHPC_SALTY -
87 PsiBlast_CBE 93.9770% -96 - C1 -4MAB - AHPC_SALTY -
88 PsiBlast_CBE 93.6570% -94 - C1 -4MAB - AHPC_SALTY -
90 PsiBlast_CBE 93.5070% -95 - C1 -4MAB - AHPC_SALTY -
14 PsiBlast_PDB 90.3570% -98 - C1 -1YEX - AHPC_SALTY -
6 PsiBlast_PDB 89.7170%-100 - C1 -4XRA - AHPC_SALTY -
15 PsiBlast_PDB 89.3270%-107 - C1 -4MAB - AHPC_SALTY -
4 PsiBlast_PDB 89.3171% -94 - C1 -1YEP - AHPC_SALTY -
11 PsiBlast_PDB 89.2970% -97 - C1 -1YF0 - AHPC_SALTY -
9 PsiBlast_PDB 89.2170% -99 - C1 -1YF1 - AHPC_SALTY -
5 PsiBlast_PDB 89.0471%-102 - C1 -4MA9 - AHPC_SALTY -
3 PsiBlast_PDB 88.6971%-101 - C1 -5B8B - AHPC_ECOLI (first) -
34 PsiBlast_CBE 88.5571%-107 - C1 -5B8A - AHPC_ECOLI (first) -
2 PsiBlast_PDB 88.5571%-100 - C1 -5B8A - AHPC_ECOLI (first) -
147 PsiBlast_CBE 75.6740% -47 - C1 -3QPM 2.8 ?