@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP57: (2017-11-19 )
MRALIQRVLEAKVEVDGQTTGEIKKGLLVFLGLGKEDTLEKGQKLIDKILKYRIFDDEQGKMGWNVSQANGGVLLVSQFTLMAQTQKGLRPDFGPAMPPSDAKALYEQLVEYTRSQFENVQTGIFAADMKVHLINDGPVTFNLT

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D3Y_A_3(4NBI)
?
[Raw transfer]



D3Y_B_5(4NBI)
?
[Raw transfer]



EPE_B_7(3LMV)
?
[Raw transfer]



EPE_A_9(3LMV)
?
[Raw transfer]



EPE_C_10(3LMV)
?
[Raw transfer]



EPE_D_8(3LMV)
?
[Raw transfer]



DHI_C_8(3KOC)
?
[Raw transfer]



DLY_C_7(3KO7)
?
[Raw transfer]



DSN_D_9(3KOD)
?
[Raw transfer]



ADP_B_8(3KO5)
?
[Raw transfer]



DSN_C_8(3KOD)
?
[Raw transfer]



ADP_A_7(3KO5)
?
[Raw transfer]



DGL_B_7(3KOB)
?
[Raw transfer]



DAR_B_7(3KO9)
?
[Raw transfer]
90 HHSearch 94.3558%-138 - C11 -1J7G - DTD_HAEIN -
2 PsiBlast_PDB 93.5757%-138 - C11 -1J7G - DTD_HAEIN -
88 HHSearch 91.4956%-126 - C11 -1JKE - DTD_ECOLI -
78 Fugue 90.9956%-135 - C11 -1JKE - DTD_ECOLI -
1 PsiBlast_PDB 90.4556%-138 - C11 -1JKE - DTD_ECOLI -
89 HHSearch 83.6850%-123 - C11 -2DBO - DTD_AQUAE -
3 PsiBlast_PDB 83.0951%-113 - C11 -2DBO - DTD_AQUAE -
94 HHSearch 81.5541% -77 - C11 -2OKV - DTD1_HUMAN -
93 HHSearch 81.3841% -75 - C11 -2OKV - DTD1_HUMAN -
4 PsiBlast_PDB 80.9641% -74 - C11 -2OKV - DTD1_HUMAN -
92 HHSearch 70.7138% -32 - C11 -4NBI - ? -
7 PsiBlast_PDB 68.2736% -27 - C11 -3KO5 3.6 ?
77 PsiBlast_CBE 68.0336% -17 - C11 -3KO3 - ? -
76 PsiBlast_CBE 67.9236% -20 - C11 -3KO3 - ? -
45 PsiBlast_CBE 67.8436% -14 - C11 -3LMV 3.0 ?
29 PsiBlast_CBE 67.5536% -18 - C11 -5J61 - ? -
69 PsiBlast_CBE 67.3436% -14 - C11 -3KO5 3.2 ?
31 PsiBlast_CBE 67.3336% -13 - C11 -5J61 - ? -
34 PsiBlast_CBE 67.1436% -24 - C11 -4NBJ - ? -
44 PsiBlast_CBE 66.9936% -18 - C11 -3LMV 2.0 ?
43 PsiBlast_CBE 65.1036% 1 - C11 -3LMV 2.3 ?
17 PsiBlast_PDB 63.2736% 40 - C11 -3LMV 2.2 ?
65 PsiBlast_CBE 61.3436% 38 - C11 -3KO7 2.9 ?