@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRK8: (2017-12-03 )
MEAQYKVLCVCLGNICRSPTAEVVFRHYCDQHQLNIIVDSARTSNYHPNKAPDQRSQLHAKKRGYDLSSLRARQLSTQDFLDFDLILAMDHQNFDDIHDLLQRAIFQFGSHQIRAKVALMSEHDPQYPQQALPDPYYGGDEGFERVLDQCESSALAWINILKKQLNV

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPE_A_3(3IDO)
?
[Raw transfer]



MPO_B_8(4LRQ)
?
[Raw transfer]



MPO_A_5(4LRQ)
?
[Raw transfer]



MPO_B_8(4LRQ)
?
[Raw transfer]



MPO_C_11(4LRQ)
?
[Raw transfer]



MPO_D_14(4LRQ)
?
[Raw transfer]



6VY_A_2(5KQL)
PPAC_HUMAN
[Raw transfer]



EPE_B_4(3IDO)
?
[Raw transfer]



6VY_A_2(5KQL)
PPAC_HUMAN
[Raw transfer]



PMS_A_5(4Z9A)
PPAC_HUMAN
[Raw transfer]



EPE_A_3(3JS5)
?
[Raw transfer]



EPE_A_2(5JNV)
PPAC_BOVIN
[Raw transfer]



MES_A_2(5KQM)
PPAC_HUMAN
[Raw transfer]



6VX_A_2(5KQG)
PPAC_HUMAN
[Raw transfer]



EPE_B_2(1DG9)
PPAC_BOVIN
[Raw transfer]



MES_B_2(5PNT)
PPAC_HUMAN
[Raw transfer]



4NP_D_4(1D1Q)
PPAL_YEAST
[Raw transfer]



4NP_D_4(1D1Q)
PPAL_YEAST
[Raw transfer]



MES_A_2(5JNT)
PPAC_HUMAN
[Raw transfer]



MES_A_2(5JNT)
PPAC_HUMAN
[Raw transfer]



EPE_C_3(1D1P)
PPAL_YEAST
[Raw transfer]



EPE_D_4(1D1P)
PPAL_YEAST
[Raw transfer]



GOL_E_5(1D1Q)
PPAL_YEAST
[Raw transfer]



GOL_E_5(1D1Q)
PPAL_YEAST
[Raw transfer]



ADE_B_6(1D2A)
PPAL_YEAST
[Raw transfer]



6LJ_A_3(5JNW)
PPAC_BOVIN
[Raw transfer]
61 HHSearch 89.3944% -93 - C8 -4LRQ 5.1 ?
71 HHSearch 86.9232%-126 - C8 -2FEK - WZB_ECOLI -
23 PsiBlast_CBE 84.9945% -67 - C8 -4LRQ 5.0 ?
1 PsiBlast_PDB 83.5445% -71 - C8 -4LRQ 5.0 ?
70 HHSearch 82.3543% - - C8 -4Z99 - PPAC_HUMAN -
22 PsiBlast_CBE 82.2945% -68 - C8 -4LRQ 5.2 ?
21 PsiBlast_CBE 80.7545% -68 - C8 -4LRQ 5.2 ?
78 HHSearch 80.7426%-124 - C8 -2WMY - ? -
4 PsiBlast_PDB 80.5542% - - C8 -4Z99 - PPAC_HUMAN -
8 PsiBlast_PDB 79.1442% -5 - C8 -5KQG 7.8 PPAC_HUMAN
76 HHSearch 77.7238%-110 - C8 -1P8A - ? -
74 HHSearch 77.5143% -3 - C8 -5KQL 7.6 PPAC_HUMAN
65 HHSearch 77.4538% -1 * C8 *1Z12 - PPAC_BOVIN -
72 HHSearch 77.2842% -1 - C8 -5JNT 3.6 PPAC_HUMAN
9 PsiBlast_PDB 76.8842% -4 - C8 -5KQL 7.6 PPAC_HUMAN
5 PsiBlast_PDB 76.8042% -3 - C8 -4Z9A 2.5 PPAC_HUMAN
11 PsiBlast_PDB 76.7542% -5 - C8 -5KQP - PPAC_HUMAN -
3 PsiBlast_PDB 76.5642% 1 - C8 -5JNS - PPAC_HUMAN -
32 PsiBlast_CBE 76.4638% 0 - C8 -1XWW - PPAC_HUMAN -
7 PsiBlast_PDB 76.0342% 2 - C8 -3N8I - PPAC_HUMAN -
10 PsiBlast_PDB 76.0142% 0 - C8 -5KQM 3.4 PPAC_HUMAN
6 PsiBlast_PDB 75.6842% -4 - C8 -5PNT 2.8 PPAC_HUMAN
13 PsiBlast_PDB 75.5539% 1 - C8 -5JNV 3.2 PPAC_BOVIN
14 PsiBlast_PDB 75.1939% 1 - C8 -5JNW 4.0 PPAC_BOVIN
20 PsiBlast_PDB 74.0938% -1 - C8 -1DG9 4.7 PPAC_BOVIN
12 PsiBlast_PDB 73.3943% -6 - C8 -5JNT 3.6 PPAC_HUMAN
24 PsiBlast_CBE 68.5939% 22 - C8 -3IDO 4.7 ?
17 PsiBlast_PDB 68.1839% 28 - C8 -3JS5 4.5 ?
15 PsiBlast_PDB 68.1839% 23 - C8 -3IDO 4.7 ?
63 HHSearch 66.0830% 21 - C8 -1D1Q 4.7 PPAL_YEAST
64 HHSearch 65.8730% 26 - C8 -1D1Q 2.7 PPAL_YEAST
39 PsiBlast_CBE 59.2733% 15 - C8 -1D1P 2.9 PPAL_YEAST
40 PsiBlast_CBE 59.0933% 13 - C8 -1D1P 3.7 PPAL_YEAST
47 PsiBlast_CBE 59.0032% 21 - C8 -1D2A 3.4 PPAL_YEAST
46 PsiBlast_CBE 58.1432% 22 - C8 -1D1Q 4.6 PPAL_YEAST
45 PsiBlast_CBE 57.8432% 24 - C8 -1D1Q 2.7 PPAL_YEAST