@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTA6: (2017-12-12 )
MSQLSTIIEQAFEDCANFTAADCPSEIRQAVEEAIAGLDNGTLRVAEKINGEWVVHQWLKKAVLLSFKLNDNKPIESCDLRFYDKVETKFSGWTEEQFKAAGVRVVPPAVARRGSFQAKNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVPGNLPSADGKYSLYAAIIVKKVDAQTRAKTSLNDLLRAD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_B_16(3TK8)
?
[Raw transfer]



EDO_A_4(3TK8)
?
[Raw transfer]



EDO_B_16(3TK8)
?
[Raw transfer]



SCO_G_7(1KGQ)
DAPD_UNKP
[Raw transfer]



COA_D_4(2TDT)
DAPD_UNKP
[Raw transfer]



COA_D_4(3TDT)
DAPD_UNKP
[Raw transfer]



SCA_G_7(1KGT)
DAPD_UNKP
[Raw transfer]



NPI_D_4(1KGQ)
DAPD_UNKP
[Raw transfer]



26P_G_7(3TDT)
DAPD_UNKP
[Raw transfer]



PML_D_4(1KGT)
DAPD_UNKP
[Raw transfer]



EDO_C_26(3TK8)
?
[Raw transfer]



JB2_A_2(4EAA)
?
[Raw transfer]
5 PsiBlast_PDB 93.3375%-141 - C- -3BXY - DAPD_ECO57 -
6 PsiBlast_PDB 93.0473%-147 - C1 -3GOS - DAPD_YERPE -
2 PsiBlast_PDB 91.6274%-130 - C1 -1KGT 7.3 DAPD_UNKP
1 PsiBlast_PDB 91.4974%-132 - C1 -1KGQ 5.7 DAPD_UNKP
4 PsiBlast_PDB 91.3874%-133 - C1 -3TDT 6.4 DAPD_UNKP
3 PsiBlast_PDB 91.1974%-130 - C1 -2TDT 7.0 DAPD_UNKP
82 HHSearch 89.8772%-129 - C1 -3GOS - DAPD_YERPE -
8 PsiBlast_PDB 89.2575%-135 - C1 -1TDT - DAPD_UNKP -
80 HHSearch 87.1174% -73 - C1 -3TK8 Error ?
7 PsiBlast_PDB 85.5874% -73 - C1 -3TK8 Error ?
23 PsiBlast_CBE 84.9374% -72 - C1 -3TK8 2.3 ?
24 PsiBlast_CBE 84.8874% -73 - C1 -3TK8 - ? -
81 HHSearch 76.1460% -17 - C- -3EG4 - DAPD_BRUSU -
9 PsiBlast_PDB 75.7558% -19 - C- -3EG4 - DAPD_BRUSU -
83 HHSearch 45.9238% -81 - C1 -3CJ8 - DAPH_ENTFA -
35 PsiBlast_CBE 43.9232%-159 - C1 -4E1K - GLMU_HAEIN -
84 HHSearch 43.4738% -72 - C1 -3R8Y - DAPH_BACAN -
41 PsiBlast_CBE 40.8932%-147 - C1 -2V0J - GLMU_HAEIN -
39 PsiBlast_CBE 40.7432%-145 - C1 -2V0L - GLMU_HAEIN -
31 PsiBlast_CBE 40.6332%-146 - C1 -4KPZ - GLMU_HAEIN -