@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTY2: (2017-12-15 )
MANQTPQAMRRIPVSDIEQRVKKAVAEQLGLKAEEIKNEASFMDDLGADSLDLVELVMSFENDFDITIPDEDSNEITTVQSAIDYVTKKLG

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSE_B_12(2FAE)
ACP_ECOLI
[Raw transfer]




1R3_A_5(4KEH)
?
[Raw transfer]




1R3_B_6(4KEH)
?
[Raw transfer]




PM5_A_12(2FAD)
ACP_ECOLI
[Raw transfer]




SXM_B_4(3NY7)
ACP_ECOLI
[Raw transfer]




PM4_A_14(2FAC)
ACP_ECOLI
[Raw transfer]




SXM_A_2(2X2B)
ACP_BACSU
[Raw transfer]




PM4_B_15(2FAC)
ACP_ECOLI
[Raw transfer]




PM5_B_13(2FAD)
ACP_ECOLI
[Raw transfer]




PNS_A_2(2FQ0)
?
[Raw transfer]




ZMK_B_6(4ETW)
ACP_SHIF8
[Raw transfer]




PNS_A_2(2FQ2)
?
[Raw transfer]




ZMK_D_5(4ETW)
ACP_SHIF8
[Raw transfer]




PM8_A_11(2FAE)
ACP_ECOLI
[Raw transfer]




1 PsiBlast_PDB 83.3768%-137 - C6 -2L0Q - ? -
3 PsiBlast_PDB 83.0362%-131 - C6 -3EJD - ACP_ECOLI -
4 PsiBlast_PDB 82.5062%-123 - C6 -3EJE - ACP_ECOLI -
25 PsiBlast_CBE 82.2462%-125 - C6 -3EJD - ACP_ECOLI -
52 PsiBlast_CBE 82.0265%-132 - C6 -2FAC 3.3 ACP_ECOLI
5 PsiBlast_PDB 81.7964%-129 - C6 -4IHF - ? -
21 PsiBlast_CBE 81.7662%-119 - C6 -3EJE - ACP_ECOLI -
10 PsiBlast_PDB 81.6564%-134 - C6 -3NY7 2.9 ACP_ECOLI
51 PsiBlast_CBE 81.6065%-135 - C6 -2FAD 3.2 ACP_ECOLI
28 PsiBlast_CBE 81.5262%-122 - C6 -3EJB - ACP_ECOLI -
27 PsiBlast_CBE 81.5262%-136 - C6 -3EJB - ACP_ECOLI -
23 PsiBlast_CBE 81.4362%-122 - C6 -3EJE - ACP_ECOLI -
48 PsiBlast_CBE 81.3165%-140 - C6 -4KEH 3.3 ?
33 PsiBlast_CBE 81.2164%-144 - C6 -4IHH - ? -
43 PsiBlast_CBE 81.2064%-140 - C6 -4IHF - ? -
11 PsiBlast_PDB 81.0464%-131 - C6 -5USR - ? -
22 PsiBlast_CBE 80.9762%-119 - C6 -3EJE - ACP_ECOLI -
14 PsiBlast_PDB 80.8565%-122 - C6 -2FAD 4.4 ACP_ECOLI
12 PsiBlast_PDB 80.7465%-135 - C6 -1T8K - ACP_ECOLI -
37 PsiBlast_CBE 80.7264%-125 - C6 -4IHG - ? -
49 PsiBlast_CBE 80.6765%-132 - C6 -4ETW 2.0 ACP_SHIF8
17 PsiBlast_PDB 80.4765%-130 - C6 -4ETW 2.0 ACP_SHIF8
18 PsiBlast_PDB 80.4165%-123 - C6 -4KEH 3.4 ?
50 PsiBlast_CBE 80.2565%-129 - C6 -2FAE Error ACP_ECOLI
15 PsiBlast_PDB 79.9865%-132 - C6 -2FAE 3.9 ACP_ECOLI
13 PsiBlast_PDB 79.8165%-132 - C6 -2FAC 4.4 ACP_ECOLI
56 PsiBlast_CBE 79.5649%-185 - C6 -2X2B 2.3 ACP_BACSU
61 PsiBlast_CBE 65.3250%-103 - C6 -2FQ0 2.0 ?
60 PsiBlast_CBE 60.6750% -82 - C6 -2FQ2 2.0 ?