@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUW8: (2017-12-20 )
MLSQFVNKTLKVLALCTGLISTSHFAQANDFVTHPNYLNFKQKAMSTYGLSGEQVDAAMNGAKNLPNIINIMTRPGESKPWYDYRSMFLVEGTIQRGVRFKNQYADALNRAEQQFGVSQAVILGILGVETGYGANKGSFITRDALATLAFGYPRRAEYFGDELAALIAWTYKEGYPTNSIVGSYAGAIGFPQFMPSNISKYGVDFDGNGHIDLRNSAEDAIGSIANYLAKQGWQCDQPIGFIARYTGSNPESIIAKDLTQPTPYGALKNQGISPLNPLVKIDDLDLVNVIQLQDYNGPIYYLTYPNFQVITTYNKSRMYATAVWLLGTEVASR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BLG_A_3(1D0L)
MLTB_ECOLI
[Raw transfer]



BLG_A_4(1D0M)
MLTB_ECOLI
[Raw transfer]



BLG_A_3(1D0L)
MLTB_ECOLI
[Raw transfer]



NAG_A_2(1QUT)
MLTB_ECOLI
[Raw transfer]



GOL_A_4(1QDT)
MLTB_ECOLI
[Raw transfer]



NAG_A_3(5AO8)
?
[Raw transfer]



GOL_A_21(1QSA)
SLT_ECOLI
[Raw transfer]



BCN_A_3(1LTM)
MLTB_ECOLI
[Raw transfer]



BCN_A_3(1QDR)
MLTB_ECOLI
[Raw transfer]



BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]



BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]



BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]



SUGAR_A_2(1D0K)
MLTB_ECOLI
[Raw transfer]
-
EDO_A_3(1QDT)
MLTB_ECOLI
[Raw transfer]



SUGAR_A_3(1D0K)
MLTB_ECOLI
[Raw transfer]
-
ALA_A_5(1D0K)
MLTB_ECOLI
[Raw transfer]
48 Fugue 93.7138%-111 - C4 -1QUS 2.2 MLTB_ECOLI
8 PsiBlast_PDB 89.3938% -35 - C4 -1D0M 4.3 MLTB_ECOLI
3 PsiBlast_PDB 88.8938% -33 - C4 -1QUT 3.0 MLTB_ECOLI
2 PsiBlast_PDB 88.7638% -34 - C4 -1QUS 2.2 MLTB_ECOLI
5 PsiBlast_PDB 88.5338% -32 - C4 -1QDT 2.5 MLTB_ECOLI
26 HHSearch 88.4438% -34 * C4 *1D0L 4.2 MLTB_ECOLI
4 PsiBlast_PDB 88.3238% -34 - C4 -1QDR 2.8 MLTB_ECOLI
7 PsiBlast_PDB 87.9738% -12 - C4 -1D0L 4.1 MLTB_ECOLI
49 Fugue 87.9630% -12 - C4 -5ANZ - ? -
6 PsiBlast_PDB 87.5538% -11 - C4 -1D0K 3.8 MLTB_ECOLI
9 PsiBlast_PDB 87.3438% -21 - C4 -1LTM 2.1 MLTB_ECOLI
1 PsiBlast_PDB 87.3137% -34 - C4 -4ANR - ? -
25 HHSearch 87.1036% -31 - C4 -4ANR - ? -
27 HHSearch 86.7138% -21 - C4 -1QUS 2.2 MLTB_ECOLI
28 HHSearch 78.5328% -11 - C4 -5ANZ - ? -
29 HHSearch 78.4328% -12 - C4 -5AO7 - ? -
10 PsiBlast_PDB 77.8530% -13 - C4 -5ANZ - ? -
12 PsiBlast_PDB 77.2330% -20 - C4 -5AO8 3.6 ?
11 PsiBlast_PDB 77.2030% -15 - C4 -5AO7 - ? -
32 HHSearch 48.1920% -94 - C4 -4CFP - MLTC_ECOLI -