@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TYY8: (2017-12-15 )
MTKIAVEKVSAEEARLMSTGFLFPGQGSQKLGMLADIPEMYMERLENVTGYRLVDKEENYQDTVFIQLALLTKAVFYLDEMEKNGIQPDIAAGHSIGAFCAAVACRSLRFENAAELVYHRAVLMKEAYPSGYAMGVVVGVTRSEAEEIVAKTFDPDHPVYLSNENCPMQHTLSGSIEGLSVTLAEAKRHQAQTAKLLKVPVPSHCLLMNDTVKKFKPYMQSVHLSDARCLYIKNTDGRATQDAEEIRKDLLENLAFPVQWNQMMDLAKELGMDLTIEFPPGNTLTKLIHTKFGVDKGIRTINLDQHGIDDATFLYQKWR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NHE_A_2(3R97)
?
[Raw transfer]



GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]



CXS_A_14(3HJV)
?
[Raw transfer]



GOL_A_2(3K89)
?
[Raw transfer]



COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]



MLA_C_3(2G2Z)
FABD_ECOLI
[Raw transfer]



GLY_A_2(3TQE)
?
[Raw transfer]



ACY_A_4(1NM2)
?
[Raw transfer]



ACY_A_3(1NM2)
?
[Raw transfer]
32 HHSearch 85.2624% 0 - C- -4V8V - ? -
8 PsiBlast_PDB 78.1831% -2 - C1 -2G1H 3.0 FABD_ECOLI
9 PsiBlast_PDB 78.1331% -2 - C1 -2G2O - FABD_ECOLI -
10 PsiBlast_PDB 78.1031% -2 - C1 -2G2Y - FABD_ECOLI -
15 PsiBlast_PDB 77.3630% 1 - C1 -3H0P - FABD_SALTY -
48 Fugue 76.8627% 7 - C1 -1NM2 4.0 ?
7 PsiBlast_PDB 76.7831% 4 - C1 -1MLA - FABD_ECOLI -
11 PsiBlast_PDB 75.9231% 4 - C1 -2G2Z 3.7 FABD_ECOLI
17 PsiBlast_PDB 75.2225% - - C1 -3PTW - ? -
1 PsiBlast_PDB 75.0731% 17 - C1 -3TQE 3.6 ?
13 PsiBlast_PDB 74.4829% -6 - C1 -3HJV 2.7 ?
26 HHSearch 74.4028% -7 - C1 -3G87 - ? -
3 PsiBlast_PDB 73.8631% -2 - C1 -3K89 2.8 ?
40 HHSearch 73.4726% - - C1 -3PTW - ? -
19 PsiBlast_PDB 73.3728% - - C- -3RGI - ? -
43 HHSearch 72.9528% 19 * C1 *3IM9 - FABD_STAAM -
4 PsiBlast_PDB 72.5431% -1 - C1 -3R97 2.5 ?
20 PsiBlast_PDB 71.4228% -1 - C1 -3SBM - ? -
6 PsiBlast_PDB 71.4230% 5 - C1 -3IM8 - ? -
12 PsiBlast_PDB 70.8028% -15 - C- -3EZO - ? -