@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXH9: (2018-01-04 )
MKIGIDRLSFFIPNLYLDMTELAESRGDDPAKYHIGIGQDQMAVNRANEDIITLGANAASKIVTEKDRELIDMVIVGTESGIDHSKASAVIIHHLLKIQSFARSFEVKEACYGGTAALHMAKEYVKNHPERKVLVIASDIARYGLASGGEVTQGVGAVAMMITQNPRILSIEDDSVFLTEDIYDFWRPDYSEFPVVDGPLSNSTYIESFQKVWNRHKELSGRGLEDYQAIAFHIPYTKMGKKALQSVLDQTDEENQERLMARYEESIRYSRRIGNLYTGSLYLGLTSLLENSKSLQPGDRIGLFSYGSGAVSEFFTGYLEENYQEYLFAQSHQEMLDSRTRITVDEYETIFSETLPEHGECAEYTSDVPFSITKIENDIRYYKI

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HMG_A_2(5HWO)
?
[Raw transfer]




HMG_A_2(5HWO)
?
[Raw transfer]




CAA_A_2(5HWQ)
?
[Raw transfer]




CAA_A_2(5HWQ)
?
[Raw transfer]




COA_B_6(1YSL)
HMGCS_ENTFL
[Raw transfer]




COA_A_8(5HWR)
?
[Raw transfer]




HMG_A_2(2FA0)
?
[Raw transfer]




COA_A_4(5HWP)
?
[Raw transfer]




MES_G_7(2HDB)
HMGCS_ENTFL
[Raw transfer]




MES_G_7(2HDB)
HMGCS_ENTFL
[Raw transfer]




MES_F_6(2HDB)
HMGCS_ENTFL
[Raw transfer]




F24_A_3(2F9A)
?
[Raw transfer]




23 PsiBlast_CBE 99.2560%-104 - C3 -3V4X - HMGCS_ENTFL -
1 PsiBlast_PDB 98.6060%-102 - C3 -3V4X - HMGCS_ENTFL -
22 PsiBlast_CBE 98.5660%-101 - C3 -3V4X - HMGCS_ENTFL -
21 PsiBlast_CBE 98.4560%-102 - C3 -3V4X - HMGCS_ENTFL -
4 PsiBlast_PDB 98.3559%-104 - C3 -1YSL 3.9 HMGCS_ENTFL
31 Fugue 98.2860%-100 - C3 -1X9E - HMGCS_ENTFL -
3 PsiBlast_PDB 97.9959%-102 - C3 -2HDB 2.3 HMGCS_ENTFL
2 PsiBlast_PDB 97.6560%-101 - C3 -1X9E - HMGCS_ENTFL -
25 PsiBlast_CBE 96.8159%-100 - C3 -2HDB 2.3 HMGCS_ENTFL
5 PsiBlast_PDB 92.0752% -89 - C3 -1XPK - ? -
45 HHSearch 91.9160% -69 - C3 -2HDB 2.3 HMGCS_ENTFL
48 HHSearch 63.8429% -20 - C3 -5KP7 - ? -
39 HHSearch 63.6237% 1 - C3 -5HWO 8.8 ?
38 HHSearch 63.3937% 3 - C3 -5HWQ 8.5 ?
15 PsiBlast_PDB 63.2829% -5 - C3 -5KP7 - ? -
13 PsiBlast_PDB 63.2529% -10 - C3 -5KP5 - ? -
14 PsiBlast_PDB 63.0629% -8 - C3 -5KP6 - ? -
16 PsiBlast_PDB 62.9229% -2 - C3 -5KP8 - ? -
7 PsiBlast_PDB 62.8836% 0 - C3 -5HWQ 8.6 ?
9 PsiBlast_PDB 62.8236% 2 - C3 -5HWP 5.9 ?
6 PsiBlast_PDB 62.7536% -1 - C3 -5HWO 8.9 ?
8 PsiBlast_PDB 62.2436% 2 - C3 -5HWR 6.1 ?