@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXS6: (2018-01-05 )
MILEYSDQLWVPQIKSWRLNERHYGKLQGLNKKETAEKYGDEQVHIWRRSYDTLPPLMEETDEGSAANDRRYAMLDKRDIPGGENLKVTLERALPFWQDEIAPALLDNKTVLVAAHGNSLRALAKHIEGISDEDIMDLEIPTGQPLVYELNDDLTVAKKYYL

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VO3_A_2(1E59)
GPMA_ECOLI
[Raw transfer]



DG2_A_3(3FDZ)
GPMA_BURP1
[Raw transfer]



DG2_B_3(2H4Z)
PMGE_HUMAN
[Raw transfer]



3PG_B_9(3GP5)
GPMA_BURP1
[Raw transfer]



3PG_A_5(3GP5)
GPMA_BURP1
[Raw transfer]



TLA_C_7(5UM0)
GPMA_NEIG2
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



IHP_J_10(1BQ3)
PMG1_YEAST
[Raw transfer]



BHC_H_8(1BQ4)
PMG1_YEAST
[Raw transfer]



TLA_C_7(5UM0)
GPMA_NEIG2
[Raw transfer]



3PG_B_4(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_B_6(2F90)
PMGE_HUMAN
[Raw transfer]



TLA_D_8(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_D_8(5UM0)
GPMA_NEIG2
[Raw transfer]



CIT_A_4(1YFK)
PGAM1_HUMAN
[Raw transfer]



CIT_B_5(1YFK)
PGAM1_HUMAN
[Raw transfer]



TLA_B_6(5UM0)
GPMA_NEIG2
[Raw transfer]



GOL_B_10(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_A_4(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



IHP_I_9(1BQ3)
PMG1_YEAST
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_D_7(1RII)
GPMA_MYCTU
[Raw transfer]



TLA_A_5(5UM0)
GPMA_NEIG2
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]



MES_A_4(4GPZ)
PGAM1_HUMAN
[Raw transfer]



3PG_B_5(3FDZ)
GPMA_BURP1
[Raw transfer]
1 PsiBlast_PDB 95.5275% -85 - C4 -5UM0 2.9 GPMA_NEIG2
23 PsiBlast_CBE 95.3075% -84 - C4 -5UM0 2.9 GPMA_NEIG2
21 PsiBlast_CBE 94.4275% -76 - C4 -5UM0 3.1 GPMA_NEIG2
22 PsiBlast_CBE 94.4075% -78 - C4 -5UM0 3.3 GPMA_NEIG2
86 HHSearch 91.4276% -71 - C4 -5UM0 3.3 GPMA_NEIG2
87 HHSearch 91.3276% -69 - C4 -5UM0 3.1 GPMA_NEIG2
11 PsiBlast_PDB 89.3154% -80 - C4 -4EMB 2.8 GPMA_BORBU
9 PsiBlast_PDB 88.4958% -86 - C4 -3LNT - GPMA_BURP1 -
29 PsiBlast_CBE 88.1658% -89 - C4 -3GP5 3.7 GPMA_BURP1
34 PsiBlast_CBE 88.0658% -96 - C4 -3EZN - GPMA_BURP1 -
7 PsiBlast_PDB 87.9958% -88 - C4 -3GP5 3.4 GPMA_BURP1
33 PsiBlast_CBE 87.6858% -82 - C4 -3FDZ 3.9 GPMA_BURP1
28 PsiBlast_CBE 87.5358% -89 - C4 -3GW8 3.0 GPMA_BURP1
8 PsiBlast_PDB 87.5358% -89 - C4 -3GW8 3.0 GPMA_BURP1
5 PsiBlast_PDB 87.3758% -94 - C4 -3EZN - GPMA_BURP1 -
10 PsiBlast_PDB 87.3555% -95 - C- -3KKK - ? -
35 PsiBlast_CBE 86.5258% -86 - C4 -3LNT - GPMA_BURP1 -
17 PsiBlast_PDB 85.9952% -77 - C4 -1BQ4 - PMG1_YEAST -
18 PsiBlast_PDB 85.9852% -72 - C4 -5PGM - PMG1_YEAST -
36 PsiBlast_CBE 85.4652% -66 - C4 -1QHF 2.4 PMG1_YEAST
14 PsiBlast_PDB 85.3452% -71 - C4 -1QHF 2.4 PMG1_YEAST
96 HHSearch 84.7456% -68 - C4 -4EMB 2.8 GPMA_BORBU
16 PsiBlast_PDB 84.5852% -65 - C4 -1BQ3 2.5 PMG1_YEAST
46 PsiBlast_CBE 83.5452% -68 - C4 -1BQ4 4.6 PMG1_YEAST
49 PsiBlast_CBE 83.2152% -70 - C4 -1BQ3 2.7 PMG1_YEAST
93 HHSearch 81.1152% -51 - C4 -1QHF 2.4 PMG1_YEAST
90 HHSearch 80.8150% -70 - C4 -1RII 2.9 GPMA_MYCTU
89 HHSearch 80.7650% -71 * C4 *1RII 3.0 GPMA_MYCTU
12 PsiBlast_PDB 78.9750% -67 - C4 -1E59 3.4 GPMA_ECOLI
70 PsiBlast_CBE 76.5452% 17 - C4 -2H4Z 3.7 PMGE_HUMAN
69 PsiBlast_CBE 76.1352% 19 - C4 -2H52 3.1 PMGE_HUMAN
77 PsiBlast_CBE 75.9352% 19 - C4 -2A9J 3.2 PMGE_HUMAN
71 PsiBlast_CBE 75.5452% 21 - C4 -2H4Z 4.0 PMGE_HUMAN
68 PsiBlast_CBE 75.5452% 24 - C4 -2H52 3.8 PMGE_HUMAN
75 PsiBlast_CBE 75.3052% 20 - C4 -2F90 3.2 PMGE_HUMAN
73 PsiBlast_CBE 75.2852% 21 - C4 -2H4X 3.2 PMGE_HUMAN
19 PsiBlast_PDB 75.2255% 36 - C4 -1YFK 3.2 PGAM1_HUMAN
72 PsiBlast_CBE 75.1252% 22 - C4 -2H4X 3.0 PMGE_HUMAN
74 PsiBlast_CBE 75.0552% 27 - C4 -2F90 3.1 PMGE_HUMAN
76 PsiBlast_CBE 74.8352% 23 - C4 -2A9J 3.0 PMGE_HUMAN
63 PsiBlast_CBE 74.3855% 34 - C4 -1YFK 3.0 PGAM1_HUMAN
103 HHSearch 71.3552% 23 - C4 -2H4Z 4.0 PMGE_HUMAN
83 PsiBlast_CBE 71.3251% 32 - C4 -1RII 2.9 GPMA_MYCTU
82 PsiBlast_CBE 71.1951% 33 - C4 -1RII 3.0 GPMA_MYCTU
80 PsiBlast_CBE 71.0751% 36 - C4 -1RII 3.0 GPMA_MYCTU
65 PsiBlast_CBE 50.6755% 4 - C4 -4GPZ 1.9 PGAM1_HUMAN
4 PsiBlast_PDB 48.0058% 62 - C4 -3FDZ 0.5 GPMA_BURP1