@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXZ4: (2018-01-06 )
MAQHVFIVGLGLIGASMALCIRQTNPELIVVGWDSQSKTREQAVEQQIVDYVASDFETGAEQADVILLAVPVRTTLAYLDVLERINLSDHVIITDVSSTKQQVVTSAEQKNLRFVGGHPMAGSHKSGIQAADAKLFENAYYIFTPLEKTKKDVEKLQELFCGTKAKYVTLTAREHDRITGMLSHFPHILAAGLVNQAEQFNQEYPRAKQLAAGGFRDITRIASSDPVMWTDILLSNKQILLERLADWQQEMTQIAEWIMTENQSEIFSFFNRAKESRDQLPVHKQGAIPAFFDLFIDVPDEPGVIAEVTGLIGKAGVSLINLKIQETREDILGILQISFKNQQDLLQAKRIIMSNTSYHCWIK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_B_7(3GGO)
?
[Raw transfer]




NAD_B_5(5USC)
?
[Raw transfer]




NAI_C_9(3GGO)
?
[Raw transfer]




NAP_A_2(4WJI)
?
[Raw transfer]




NAD_A_2(3B1F)
?
[Raw transfer]




ENO_B_6(3GGO)
?
[Raw transfer]




ENO_C_8(3GGO)
?
[Raw transfer]




TYR_A_3(4WJI)
?
[Raw transfer]




TYR_A_3(4WJI)
?
[Raw transfer]




TYR_B_8(3GGG)
?
[Raw transfer]




TYR_C_10(3GGG)
?
[Raw transfer]




22 PsiBlast_CBE 83.0444% -55 - C2 -5UYY - ? -
2 PsiBlast_PDB 81.4844% -56 - C2 -5UYY - ? -
1 PsiBlast_PDB 81.3444% -54 - C2 -5USC - ? -
24 PsiBlast_CBE 80.6244% -53 - C2 -5USC 8.0 ?
46 HHSearch 80.5243% -37 - C2 -5UYY - ? -
47 HHSearch 79.4543% -34 - C2 -5USC - ? -
21 PsiBlast_CBE 79.0044% -54 - C2 -5UYY - ? -
23 PsiBlast_CBE 78.6544% -53 - C2 -5UYY - ? -
4 PsiBlast_PDB 70.6344% -77 - C2 -3B1F 7.9 ?
54 HHSearch 69.2245% -50 * C2 *3B1F - ? -
3 PsiBlast_PDB 68.3346% -60 - C2 -3DZB - ? -
9 PsiBlast_PDB 61.0631% -65 - C2 -4WJI 10.1 ?
5 PsiBlast_PDB 59.4731% -14 - C2 -3GGG - ? -
55 HHSearch 58.9830% -8 - C2 -4WJI 3.3 ?
7 PsiBlast_PDB 58.5231% -14 - C2 -3GGP - ? -
48 HHSearch 58.3931% 6 - C2 -2G5C - ? -
25 PsiBlast_CBE 58.1831% -15 - C2 -3GGP - ? -
33 PsiBlast_CBE 57.8931% -19 - C2 -3GGG - ? -
28 PsiBlast_CBE 57.8031% -17 - C2 -3GGO - ? -
26 PsiBlast_CBE 57.8031% -14 - C2 -3GGP - ? -
29 PsiBlast_CBE 57.7831% -15 - C2 -3GGO 10.1 ?
30 PsiBlast_CBE 57.4431% -21 - C2 -3GGO 9.4 ?
31 PsiBlast_CBE 57.1931% -17 - C2 -3GGG 3.6 ?
32 PsiBlast_CBE 55.9331% -18 - C2 -3GGG 3.3 ?