@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXZ6: (2018-01-07 )
MASILLIGFMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQLSIAEYFHYYGEKSFRKVESDILRKLSNEDKIIATGGGIVQSAENRRFLKTQPIVLYLEAEADCLVDRIQQDETSIRPLALGKTREEIKALLAQRLSWYEESATHRINTTNQTPEKIIDTIIERIKSI

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

S3P_A_2(2IYZ)
AROK_MYCTU
[Raw transfer]




S3P_A_2(2IYY)
AROK_MYCTU
[Raw transfer]




OSA_A_4(3N2E)
AROK_HELPY
[Raw transfer]




S3P_A_3(3MUF)
AROK_HELPY
[Raw transfer]




SKM_C_3(1ZUI)
AROK_HELPY
[Raw transfer]




OSA_B_7(3N2E)
AROK_HELPY
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_2(2IYQ)
AROK_MYCTU
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_6(1U8A)
AROK_MYCTU
[Raw transfer]




SKM_A_7(2G1K)
AROK_MYCTU
[Raw transfer]




SKM_A_2(2IYX)
AROK_MYCTU
[Raw transfer]




SKM_A_4(2DFN)
AROK_MYCTU
[Raw transfer]




SKM_A_3(3BAF)
AROK_MYCTU
[Raw transfer]




K2Q_A_5(4BQS)
AROK_MYCTU
[Raw transfer]




K2Q_B_7(4BQS)
AROK_MYCTU
[Raw transfer]




K2Q_C_9(4BQS)
AROK_MYCTU
[Raw transfer]




SKM_C_3(1ZYU)
AROK_MYCTU
[Raw transfer]




SKM_B_4(2IYR)
AROK_MYCTU
[Raw transfer]




SKM_A_3(2IYR)
AROK_MYCTU
[Raw transfer]




SKM_A_2(2IYS)
AROK_MYCTU
[Raw transfer]




DHK_A_6(1WE2)
AROK_MYCTU
[Raw transfer]




ADP_B_7(2SHK)
AROL_DICCH
[Raw transfer]




ADP_A_2(3MUF)
AROK_HELPY
[Raw transfer]




TLA_B_9(3N2E)
AROK_HELPY
[Raw transfer]




PEG_A_6(3VAA)
AROK_BACTN
[Raw transfer]




PEG_A_6(3VAA)
AROK_BACTN
[Raw transfer]




TLA_A_5(3N2E)
AROK_HELPY
[Raw transfer]




TLA_A_5(3N2E)
AROK_HELPY
[Raw transfer]




MRD_A_6(1E6C)
AROL_DICCH
[Raw transfer]




MPD_B_10(1E6C)
AROL_DICCH
[Raw transfer]




BME_B_7(3VAA)
AROK_BACTN
[Raw transfer]




BME_C_10(3VAA)
AROK_BACTN
[Raw transfer]




90 HHSearch 80.8031% -76 - C1 -1E6C - AROL_DICCH -
85 HHSearch 80.3133% -18 - C1 -3TRF - AROK_COXBU -
29 PsiBlast_CBE 79.9231% -90 - C1 -2SHK 5.1 AROL_DICCH
35 PsiBlast_CBE 79.6434% -9 - C1 -4Y0A 4.3 ?
92 HHSearch 79.6236% -12 * C1 *4Y0A 4.3 ?
33 PsiBlast_CBE 79.3831% -76 - C1 -1E6C 3.2 AROL_DICCH
5 PsiBlast_PDB 79.3636% -14 - C1 -2IYU - AROK_MYCTU -
34 PsiBlast_CBE 79.3231% -70 - C1 -1E6C 3.4 AROL_DICCH
91 HHSearch 79.1534% -35 - C1 -2IYV - AROK_MYCTU -
8 PsiBlast_PDB 78.2136% -18 - C1 -2IYX 4.0 AROK_MYCTU
86 HHSearch 78.0633% -12 - C1 -3TRF - AROK_COXBU -
20 PsiBlast_PDB 78.0036% -19 - C1 -3BAF 2.8 AROK_MYCTU
1 PsiBlast_PDB 77.8636% -17 - C1 -2IYQ 4.1 AROK_MYCTU
98 HHSearch 77.7533% -24 - C1 -3NWJ - SK2_ARATH -
3 PsiBlast_PDB 77.6736% -4 - C1 -2IYS 2.4 AROK_MYCTU
7 PsiBlast_PDB 77.4136% -7 - C1 -2IYW - AROK_MYCTU -
4 PsiBlast_PDB 77.3336% -7 - C1 -2IYT - AROK_MYCTU -
88 HHSearch 77.2037% -51 - C1 -1KAG - AROK_ECOLI -
17 PsiBlast_PDB 77.0436% -22 - C1 -2G1K 3.4 AROK_MYCTU
6 PsiBlast_PDB 77.0436% -8 - C1 -2IYV - AROK_MYCTU -
22 PsiBlast_CBE 77.0336% -22 - C1 -4BQS 4.5 AROK_MYCTU
24 PsiBlast_CBE 77.0236% -25 - C1 -4BQS 4.3 AROK_MYCTU
23 PsiBlast_CBE 76.9936% -22 - C1 -4BQS 4.7 AROK_MYCTU
9 PsiBlast_PDB 76.7836% -20 - C1 -2IYY 3.9 AROK_MYCTU
13 PsiBlast_PDB 76.5836% -21 - C1 -1U8A 3.5 AROK_MYCTU
10 PsiBlast_PDB 76.2236% -20 - C1 -2IYZ 3.9 AROK_MYCTU
14 PsiBlast_PDB 76.0736% -19 - C1 -1WE2 3.7 AROK_MYCTU
94 HHSearch 75.9232% -36 - C1 -3VAA 2.2 AROK_BACTN
15 PsiBlast_PDB 75.7436% -15 - C1 -1ZYU 3.8 AROK_MYCTU
18 PsiBlast_PDB 75.4236% -15 - C1 -2DFN 3.3 AROK_MYCTU
21 PsiBlast_CBE 74.1736% -12 - C1 -2IYR 4.0 AROK_MYCTU
2 PsiBlast_PDB 73.8036% -9 - C1 -2IYR 2.9 AROK_MYCTU
89 HHSearch 73.5833% -26 - C1 -3N2E 2.9 AROK_HELPY
40 PsiBlast_CBE 70.6834% -67 - C1 -3VAA 2.2 AROK_BACTN
41 PsiBlast_CBE 67.2535% -52 - C1 -3N2E 5.5 AROK_HELPY
42 PsiBlast_CBE 65.6135% -46 - C1 -3N2E 5.1 AROK_HELPY
46 PsiBlast_CBE 65.2235% -30 - C1 -1ZUI 5.1 AROK_HELPY
43 PsiBlast_CBE 63.6335% -46 - C1 -3MUF 5.7 AROK_HELPY