@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : OR4A4_HUMAN: (2016-01-13 )
MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMSFFLAGLTFIDIIYSSSISPRLISDLFFGNNSISFQSFMAQLFIEHLFGGSEVFLLLVMAYDRYVAICKPLHYLVIMRQWVCVLLLVVSWVGGFLQSVFQLSIIYGLPFCGPNVIDHFFCDMYPLLKLACTDTHVIGLLVVANGGLSCTIAFLLLLISYGVILHSLKKLSQKGRQKAHSTCSSHITVVVFFFVPCIFMCARPARTFSIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKL

Atome Classification :

(20 SA) ---------.........10....--..---------------..20........30........---40........50........60........70----.....-....80........90.......--.100.......110--.......120...----------...--------.130----------------......----.140-----........150.......-----160--.....-....170.......180..--.....190.------......200.......210....----....220.......------------230-------------------.-----..---------------...-...240.......250--------.-....-----------..260-.--.------.-.-------------.---.----.---------..270.......280.......-290.......----------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------MEPRKNVTDFVLLGF--TQ---------------NPKEQKVLFVMFLLFYILTMVG---NLLIVVTVTVSETLGSPMSFFLAGLTFIDII-----YSSSI-SPRLISDLFFGNNSISFQSFMAQ--LFIEHLFGGSEVFL--LLVMAYDRYVAIC----------KPL--------HYLV----------------IMRQWV----CVL------LLVVSWVGGFLQSVFQLS-----I----IYGLP-FCGPNVIDHFFCDMYPLLK--LACTDTHVI------GLLVVANGGLSCTIAFL-LLLIS----YGVILHSLKKLSQK------------G---------------------R-----QK---------------AHS-TCSSHITVVVFFFVPC--------I-FMCA-----------RPA---R--T------F-S-------------I---D----K---------SVSVFYTVITPMLNPLIYTLRN-SEMTSAMKKL----------------------------
5 PsiBlast_PDB 90.3222%-158 - C2 -4ZWJ - ? A:[204-477] -----------------------------------------------------MFLLIVLGFPIN---FLTLYVTVQ-HKKLRTPLNYILLNLAVADLFMVLGGFTSTL-YTSLHGYFVFGPTGCNLQGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWV----MAL------ACAAPPLAGWSRYIPE--------------GLQCSCG--------IDYYTLKP--EVNNESFVI------YMFVV-----HFTIPMI-IIFFC----YGQLVFTVKEAAAQ------------Q---------------------Q-----ES---------------ATTQKAEKEVTRMVIIYVIA--------F-LICW-----------VPY---A--S------V-AFYIFTHQGSCFGPI---F----M---------TIPAFFAKSAAIYNPVIYIMMN-KQFRNCMLTT----------------------------
39 Fugue 88.9320%-135 - C2 -1F88 OPSD_BOVIN A:[1-348] ---------MNGTEGPNFYVPFSN--KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPI---NFLTLYVTVQHKKLRTPLNYILLNLAVADLF-----MVFGG-FTTTLYTSLHGYFVFGPTGCNLE--GFFATLGGEIALWS--LVVLAIERYVVVC----------KPM--------SNFR-----------------FGENH----AIM------GVAFTWVMALACAAPPLVGWSRYI----PEGMQCSCGI--------DYYTPHE--ETNNESFVI------YMFVVH-----FIIPLI-VIFFC----YGQLVFTVKEAAAS------------AT--------------------T-----QK---------------AEK-EVTRMVIIMVIAFLIC--------W-LPYA-----------GVA---F--Y------I-F-------------T---H----QGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA------
34 HHSearch 84.8715%-146 - C2 -2Z73 OPSD_TODPA A:[33-329] ----------------------------------------------VYYSLGIFIGICGIIGCGG---NGIVIYLFTKTKSLQTPANMFIINLAFSDFT-----FSLVNGFPLMTISCFLKKWIFGFAACKVY--GFIGGIFGFMSIMT--MAMISIDRYNVIG----------RPM--------AASK----------------KMSHRR----AFI------MIIFVWLWSVLWAIGPIF-----G----WGAYT-----LEGVLCNCSFDYISR--D----S-TT------RSNILCMFILGFFGPIL-IIFFC----YFNIVMSVSNHEKE------------MAAMAKRLNAKELRKAQAGANAE-----MR---------------LAK-ISIVIVSQFLLSWSPY--------A-VVAL-----------LAQ---F--GPLEW--VTP-------------Y---A----A---------QLPVMFAKASAIHNPMIYSVSH-PKFREAISQT----------------------------
15 PsiBlast_PDB 84.5820%-157 - C2 -3PQR OPSD_BOVIN A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
17 PsiBlast_PDB 84.2420%-154 - C2 -4J4Q GNAT1_BOVIN (first) A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
14 PsiBlast_PDB 84.1920%-152 - C2 -3DQB GNAT1_BOVIN (first) A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
12 PsiBlast_PDB 83.7920%-149 - C2 -3C9L OPSD_BOVIN A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
13 PsiBlast_PDB 82.9520%-145 - C2 -1F88 OPSD_BOVIN A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAA------------------------------------SATT-QK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
11 PsiBlast_PDB 82.7420%-156 - C2 -3CAP OPSD_BOVIN A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
16 PsiBlast_PDB 82.6820%-153 - C2 -3PXO OPSD_BOVIN A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
18 PsiBlast_PDB 82.3920%-154 - C2 -4PXF OPSD_BOVIN A:[45-317] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
40 Fugue 81.9420%-123 - C2 -1U19 OPSD_BOVIN A:[4-349] ---------MNGTEGPNFYVPFSN--KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPI---NFLTLYVTVQHKKLRTPLNYILLNLAVADLF-----MVFGG-FTTTLYTSLHGYFVFGPTGCNLE--GFFATLGGEIALWS--LVVLAIERYVVVC----------KPM--------SNFR-----------------FGENH----AIM------GVAFTWVMALACAAPPLVGWSRYI----PEGMQCSCGI--------DYYTPHE--ETNNESFVI------YMFVVHF-----IIPLI-VIFFC----YGQLVFTVKEAAAQQQESA-------T---------------------T-----QK---------------AEK-EVTRMVIIMVIAFLIC--------W-LPYA-----------GVA---F--Y------I-F-------------T---H----QGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
6 PsiBlast_PDB 80.1520%-125 - C2 -4A4M OPSD_BOVIN A:[48-318] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------Q-----ES---------------ATTQKAEKEVTRMVIIYVIA--------F-LICW-----------LPY---A--G------V-AFYIFTHQGSCFGPI---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
20 PsiBlast_PDB 77.4520%-118 - C2 -1GZM OPSD_BOVIN A:[48-318] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
19 PsiBlast_PDB 76.8320%-119 - C2 -3OAX OPSD_BOVIN A:[48-318] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLEGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------QESATTQK---------------AEK-EVTRMVIIMVIAFLICWLPYAGVAF-YIFT-----------HQG---S--D------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
7 PsiBlast_PDB 76.4820%-128 - C2 -2X72 GNAT1_BOVIN (first) A:[48-318] ----------------------------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL-YTSLHGYFVFGPTGCNLQGFFAT--L-------GGEIALWSLVVLAIERYVVVC----------KPMSNFRFGENHAIMG---------------VAFTWVMALACAA------PPLVGW-SRYIPEGMQCS-----------------CG--------IDYYTPHE--ETNNESFVI------YMFVV-----HFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------Q---------------------Q-----ES---------------ATTQKAEKEVTRMVIIMVIA--------F-LICW-----------LPY---A--G------V-AFYIFTHQGSCFGPI---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
48 Fugue 76.4220%-166 - C1 -4Q9T - ? A:[12-446] TKILTETEKYSVTKLSTDLSFLPFEGLV---------------DTALQKALVNDLDHIYIWNYNS---IQKDTPICKISLHSSPPICLFTSSINGICII-----NKKNS-QFLYFEDISTINNLAHVLDLKLKDNENITSTINCEPSGI--IIATSLGRVLFITIKDSTGKPKLELK--------QQLIKPQNSFFFRNLDSSKEIISLKK----GPIVGKGERLLYITTRGGSLQ-IWQLS-----INSKSFKRLE-INIYEHVLDSLQDLYPFAHGTLAFLDSHPIYSDTSSAHLTLASISNGNEIYYLMITVILDEKTNSFQIFSIYKLNTY------------F---------------------T-----KSTVDLNHKPQLFIPNALDS-IVSPTLSVYVLFNNAV--------VMTQISSKLDSSFPLRRKWE---D--I------I-R-------------F---N----K---------DVEIIGSGYST--DSIYVICKDMGVLKIASH------------------------------
29 HHSearch 76.0114%-135 * C2 *2KS9 NK1R_HUMAN A:[35-319] --------------------------------------------------WAAAYTVIVVTSVVG---NVVVMWIILAHKRMRTVTNYFLVNLAFAEAS-----MAAFN-TVVNFTYAVHNEWYYGLFYCKFH--NFFPIAAVFASIYS--MTAVAFDRYMAII----------HPL--------QPRL------------------SATA----TKV------VICVIWVLALLLAFPQGY-----Y----STT-E-----TMPSRVVCMIEWPEH--PN--KIYE-------KVYHICVTVLIYFLPLL-VIGYA----YTVVGITLWASEIPGDSSDRYHEQVSA---------------------K-----RK---------------VVK-MMIVVVCTFAICWLPF--------H-IFFL-----------LPYINPD--LY-----L-KK------------FIQQV----Y---------LAIMWLAMSSTMYNPIIYCCLN-DRFRLGFKHA----------------------------
32 HHSearch 75.4916%-140 - C2 -1U19 OPSD_BOVIN A:[39-320] ----------------------------------------------QFSMLAAYMFLLIMLGFPI---NFLTLYVTVQHKKLRTPLNYILLNLAVADLF-----MVFGG-FTTTLYTSLHGYFVFGPTGCNLE--GFFATLGGEIALWS--LVVLAIERYVVVC----------KPM--------SNFR-----------------FGENH----AIM------GVAFTWVMALACAAPPLV-----G----WSRYI-----PEGMQCSCGIDYYTP--HE--ETNN-------ESFVIYMFVVHFIIPLI-VIFFC----YGQLVFTVKEAAAQ------------QQESATTQKA------------E-----KE---------------VTR-MVIIMVIAFLICWLPY--------A-GVAF-----------YIFTH-QGSD------F-GP------------I---F----M---------TIPAFFAKTSAVYNPVIYIMMN-KQFRNCMVTT----------------------------
28 HHSearch 74.5215%-129 - C2 -2LNL - CXCR1_HUMAN A:[39-319] -----------------------------------------------KYVVIIAYALVFLLSLLG---NSLVMLVILYSRVGRSVTDVYLLNLALADLL-----FAL-T-LPIWAASK-VNGWIFGTFLCKVV--SLLKEVNFYSGILL--LACISVDRYLAIV----------HAT--------RTLT-----------------QKRHL----VKF------VCLGCWGLSMNLSLPFFL-----F----RQAYH-----PNNSSPVCYEVLGND--T---AKWR-------MVLRILPHTFGFIVPLF-VMLFC----YGFTLRTLFKAHMG------------Q---------------------K-----HR---------------AMR-VIFAVVLIFLLCWLPY--------N-LVLL-----------ADTLM-RTQVIQESCER-R-------------N---NIGRAL---------DATEILGFLHSCLNPIIYAFIG-QNFRHGFLKI----------------------------