@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : new_query: (2014-05-07 )
VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------........--.10.......------------------.-----20--.-------------.-------------------.----------..--..---..30.....-----...-----------40........50..-------.-.-.--.------.---------.-------60---------.......--..70.......---.80........--------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTCGQVAS--GLASCIPYLK------------------T-----G---G-------------T-------------------P----------PP--KC---CSGVKAIKS-----LAI-----------TPADRKTICGCLKS-------G-Y-S--S------S---------Y-------N----------PSLAASL--PGKCGVSVPYK---ISPDTDCSKVQ--------
21 HHSearch 95.6154%-117 - C4 -2ALG NLTP1_PRUPE A:[2-92] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQVSS--SLAPCIPYVR------------------G-----G---G-------------A-------------------V----------PP--AC---CNGIRNVNN-----LAR-----------TTPDRQAACNCLKQ-------L-S-ASVP------G---------V-------N----------PNNAAAL--PGKCGVSIPYK---ISASTNCATVK--------
25 HHSearch 93.7257%-122 - C4 -1T12 - NLTP1_TOBAC A:[2-91] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQVTS--NLAPCLAYLR------------------N-----T---G---------------------------------P----------LG--RC---CGGVKALVN-----SAR-----------TTEDRQIACTCLKS-------A-A-GAIS------G---------I-------N----------LGKAAGL--PSTCGVNIPYK---ISPSTDCSKVQ--------
11 SP3 92.3351%-112 - C4 -1FK5 NLTP_MAIZE A:[1-93] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AISCGQVAS--AIAPCISYAR------------------G-----Q---G-------------SG------------------P----------SA--GC---CSGVRSLNN-----AAR-----------TTADRRAACNCLKN-------A-A-AGVS------G---------L-------N----------AGNAASI--PSKCGVSIPYT---ISTSTDCSRVN--------
22 HHSearch 91.8551%-127 - C4 -1SIY - NLTP1_VIGRR A:[1-91] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTCGQVQG--NLAQCIGFLQ------------------K-----G---G-------------V-------------------V----------PP--SC---CTGVKNILN-----SSR-----------TTADRRAVCSCLKA-------A-A-GAVR------G---------I-------N----------PNNAEAL--PGKCGVNIPYK---ISTSTNCNSIN--------
26 HHSearch 85.7541%-116 - C4 -1BWO NLTP1_WHEAT A:[1-90] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDCGHVDS--LVRPCLSYVQ------------------G-----G---P-------------G-------------------P----------SG--QC---CDGVKNLHN-----QAR-----------SQSDRQSACNCLKG-------I-A-RGIH------N---------L-------N----------EDNARSI--PPKCGVNLPYT---ISLNIDCSRV---------
23 HHSearch 85.4252%-105 - C4 -1AFH - NLTP_MAIZE A:[2-93] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISCGQVAS--AIAPCISYAR------------------G-----Q---G-------------SG------------------P----------SA--GC---CSGVRSLNN-----AAR-----------TTADRRAACNCLKN-------A-A-AGVS------G---------L-------N----------AGNAASI--PSKCGVSIPYT---ISTSTDCSRVN--------
33 HHSearch 58.3023%-119 - C4 -1BEA - ITRF_MAIZE A:[15-109] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--PLPSCRWYVT------------------SRTCG-I---G-------------PR------------------LPWPEL-----KR--RC---CRELADI------------------------PAYCRCTALSI-------L-M-D--GAIPPG-P---------DAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------------------
27 HHSearch 57.8929%-104 - C4 -2RKN DIRL1_ARATH A:[4-75] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCGMSQD--ELNECKPAVS------------------K-----E---NPT-----------S-------------------P----------SQ--PC---CTALQHA------------------------DFACLCGYKNS-------PWLGS--F------G---------V-------D----------PELASAL--PKQCGLANAP-----------------------
32 HHSearch 54.4719%-113 - C4 -1B1U - IAAT_ELECO A:[15-109] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--PLDSCRWYVS------------------TRTCG-V---G-------------PRLATQE-------------M----------KA--RC---CRQLEAI------------------------PAYCRCEAVRI-------L-M-D--GVVTPS-GQHEGRLLQDL-------PGCPRQVQRA-FAPKLVT--EVECNLATIH-----------------------
3 Fugue 54.4627%-116 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC--NAG--QLTVCTGAIA------------------G-----G---A-------------R-------------------P----------TA--AC---CSSLRAQQG-----C--------------------FCQFAKD-------P-R-Y--G------R---------YV------N----------SPNARKA--VSSCGIALPT----------CH-----------
2 Fugue 53.1630% -95 - C4 -2RKN DIRL1_ARATH A:[1-77] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AIDLCGMSQD--ELNECKPAVS------------------K-----E---N-------------P-------------------T----------SPSQPC---CTALQ------------------------HADFACLCGYKNS-------P-W-L--G------S---------FGV-----D----------PELASAL--PKQCGLANA---------PTC------------
36 HHSearch 51.5523%-110 - C4 -1SM7 - ? A:[13-101] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--HLRACQQWIR------------------QQLA--G---SPFSENQWGPQQGPS-------------------L----------RE--QC---CNELYQE------------------------DQVCVCPTLKQ-------A-A-K--SVRVQ--GQ--------HGPFQSTRI----------YQIAKNL--PNVCNMKQI------------------------
39 HHSearch 51.4722% -86 - C4 -2LVF - ? A:[16-101] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q--MLSHCRMYMR------------------QQME--ES--T-------------Y-------------------QTMPRRGMEPHMS--EC---CEQLEGM------------------------DESCRCEGLRM-------M-M-R--MMQQKEMQ---------PRGEQMRRM----------MRLAENI--PSRCNLS--------------------------
41 HHSearch 51.2724%-110 - C4 -1S6D - 2SS8_HELAN A:[19-97] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E--MLNHCGMYLM------------------KNLGERS---QVSPRMREE-----D-------------------H----------KQ--LC---CMQLKNLDE------------------------KCMCPAIMM-------M-L-N--EPMW---IRMRD-----Q-------V----------MSMAHNL--PIECNLM--------------------------
40 HHSearch 51.0219% -83 - C4 -1W2Q - CONG_ARAHY A:[22-114] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RV--NLKPCEQHIM------------------QRIM--G---EQEQ----------YDSYDIRSTRSSD-------Q----------QQ--RC---CDELNEME---------------------N-TQGCMCEALQQ-------I-M-E--NQCDRLQD---------R-------QMVQQF-----KRELMSL--PQQCNFRAP------------------------
18 SP3 48.7313%-117 - C4 -1QPO - NADC_MYCTU A:[1-284] GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVR------------------N-----A-----------------A-------------------P----------DL--PCEVEVDSLEQLDA-----VLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLE-S-S--G------G---------L-------S----------LQTAATY---AETGVDY------LAVGALTHSVRVLDIGLDM
13 SP3 48.1920% -88 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC--NAG--QLTVCTGAIA------------------G-----G---A-------------R-------------------P----------TA--AC---CSSLRA-------------------------QQGCFCQFAKD-------P-R-Y--G------RY--------V-------N----------SPNARKA--VSSCGIALP----------TCH-----------
35 HHSearch 47.3324% -78 - C4 -1PSY - 2SS_RICCO A:[25-121] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K--DLSSCERYLR------------------Q-----SSSRR-------------STGEEVLRMPGDENQQQESQQ----------LQ--QC---CNQVKQV------------------------RDECQCEAIKY-------I-A-E--DQIQQ--GQ--------LHGEESERV----------AQRAGEI--VSSCGV--RCM---RQ-----------------
15 SP3 47.1713%-117 - C4 -1QPO - NADC_MYCTU A:[116-284] -------------------------------------------------------------------------------------------------------------------IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVR------------------N-----A-----------------A-------------------P----------DL--PCEVEVDSLEQLDA-----VLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLE-S-S--G------G---------L-------S----------LQTAATY---AETGVDY------LAVGALTHSVRVLDIGLDM
6 Fugue 44.5716% -59 - C4 -1W2Q - CONG_ARAHY A:[1-127] ------------------------------------------------------------------------------------------------------------------------------------------------------------GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTR-----S---S-------------D-------------------Q----------QQ--RC---CDELNEMENTQGCMCEA-----------LQQIMENQCDRLQD-------R-Q-M--V------Q---------Q-------F----------KRELMSL--PQQCNFRAPQRCDLDVSGGRCS-----------


User Run . : Multi Template Modeling Result:

(3 SA) .........10........20........30........40........50........60........70........80........
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ
42 100.00100%-127 - C- -M042 - A:[1-93] VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ
48 97.16100%-134 - C- -M048 - A:[1-93] VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ
46 95.69100%-124 - C- -M046 - A:[1-93] VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ