@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : 541_tII_POPTR: (2014-05-10 )
VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC

Atome Classification :

(20 SA) ----------------------------------------------------------------...--.--..--..---.10....--.-..--.--20.-----........30-----------.-----.-......40.------.-.------------..-----..--------.50...-.....60..-.-..-------..-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------VTC--S--PA--QL---SSCVSAI--T-SS--T--P-P-----SKLCCSKIKE-----------Q-----K-PCLCQYLKN------P-N------------LQ-----KF--------INTPNA-RKVASTCGT-P-FP-------KC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 92.7140% -98 - C4 -1N89 NLT2G_WHEAT A:[1-67] -----------------------------------------------------------------AC--Q--AS--QL---AVCASAI--L-SG--A--K-P-----SGECCGNLRA-----------Q-----Q-GCFCQYAKD------P-T------------YG-----QY--------IRSPHA-RDTLTSCGL-A-VP-------HC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 87.9240%-103 - C4 -1L6H - NLTPX_ORYSJ A:[1-68] ----------------------------------------------------------------AGC--N--AG--QL---TVCTGAI--A-GG--A--R-P-----TAACCSSLRA-----------Q-----Q-GCFCQFAKD------P-R------------YG-----RY--------VNSPNA-RKAVSSCGI-A-LP-------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 SP3 87.0539%-103 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] ----------------------------------------------------------------AGC--N--AG--QL---TVCTGAI--A-GG--A--R-P-----TAACCSSLRA-----------Q-----Q-GCFCQFAKD------P-R------------YG-----RY--------VNSPNA-RKAVSSCGI-A-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 Fugue 87.0539%-103 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] ----------------------------------------------------------------AGC--N--AG--QL---TVCTGAI--A-GG--A--R-P-----TAACCSSLRA-----------Q-----Q-GCFCQFAKD------P-R------------YG-----RY--------VNSPNA-RKAVSSCGI-A-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 83.6928%-104 - C4 -2RKN DIRL1_ARATH A:[9-77] ------------------------------------------------------------------------QD--EL---NECKPAV--S-KE--NPTS-P-----SQPCCTALQH-----------A-----DFACLCGYKNS------P-W------------LG-----SFG-------VDPELA-SALPKQCGL-A-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 Fugue 82.9930% -94 - C4 -2RKN DIRL1_ARATH A:[1-77] --------------------------------------------------------------AIDLCGMS--QD--EL---NECKPAV--S-KENPT--S-P-----SQPCCTALQHA----------D-----F-ACLCGYKNS------P-W------------LG-----SFG-------VDPELA-SALPKQCGL-A-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 73.3728% -55 - C4 -1BWO NLTP1_WHEAT A:[8-78] -------------------------------------------------------------------------S--LV---RPCLSYV--Q-GG--P--G-P-----SGQCCDGVKNLHNQARSQSDRQ-----S-ACNCLKGIA------R-G------------IH------N--------LNEDNA-RSIPPKCGV-N-LP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 72.9634% -74 * C4 *1T12 - NLTP1_TOBAC A:[3-78] -----------------------------------------------------------------TC--G--QVTSNL---APCLAYL--R-NT--G----P-----LGRCCGGVKALVNSARTTEDRQ-----I-ACTC--LKS------A-A-------------G-----AISG------INLGKA-AGLPSTCGV-N-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 72.0029% -72 - C4 -2ALG NLTP1_PRUPE A:[2-79] ----------------------------------------------------------------ITC--G--QVSSSL---APCIPYV--R-GG--G--A-V-----PPACCNGIRNVNNLARTTPDRQ-----A-ACNC--LKQ------L-S-------------A-----SVPG------VNPNNA-AALPGKCGV-S-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 71.7832% -72 - C4 -1AFH - NLTP_MAIZE A:[3-80] -----------------------------------------------------------------SC--G--QVASAI---APCISYA--R-GQ--G--SGP-----SAGCCSGVRSLNNAARTTADRR-----A-ACNC--LKN------A-A-------------A-----GVSG------LNAGNA-ASIPSKCGV-S-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 71.4629%-105 - C4 -1HYP - HPSE_SOYBN A:[10-73] ----------------------------------------------------------------------------DL---SICLNILGGS-LG--T----------VDDCCALIGG-----------LGDIEAI-VCLCIQLRA---------------------LG-----I---------LNLNRNLQLILNSCGR-S-YP-------S--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 SP3 64.8323% -73 - C4 -1FK5 NLTP_MAIZE A:[1-93] ---------------------------------------------------------------AISC--GQVAS--AI---APCISYA--R-GQ--G--SGP-----SAGCCSGVRS-----------L-----N-NA----ART------T-ADRRAACNCLKNAAA-----GVSG------LNAGNA-ASIPSKCGV-S-IPYTISTSTDCSRVN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 63.9623% -60 - C4 -1SIY - NLTP1_VIGRR A:[8-78] -------------------------------------------------------------------------G--NL---AQCIGFL--Q-KG--G--V-V-----PPSCCTGVKNILNSSRTTADRR-----A-VCSCLKAAA------G-A------------VR------G--------INPNNA-EALPGKCGV-N-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 SP3 57.1714% -82 - C4 -1U78 - TC3A_CAEEL A:[2-104] -------------------------------------------------------------PRGSAL--S--DT--ER---AQ-LDVM--K-LL--N--V-S-----LHEMSRKISR-----------S-----R-HCIRVYLKD------PVS------------YG-----TSKRAPRRKALSVRDE-RNVIRAASN-S-CK-------TARDIRNELQLSASKRTILNVIKRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 SP3 54.5319% -53 - C4 -1KNG - CYCY_BRADU A:[50-193] ---------------------------------------------------RPAPQTALPPLEGLQA--D--NV--QV---PGLDPAA--F-KG-----K-VSLVNVWASWCVPCHD-----------E-----A-PLLTELGKD------K-R------------FQLVGINYK--------DAADNA-RRFLGRYGN-P-FG-------RVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKAL-------------------------------------------------------------------------------------------------------------------------------------------
9 Fugue 54.1516% -76 - C4 -1E68 - ? A:[1-70] -------------------------------------------------------------MAKEFG--I--PA--AV---AGTVLNV--V-EA--G--G-W-----VTTIVSILTA-----------V-----G-SGGLSLLAA------A-GRESIKAY-----LK-----KE--------IKKKGK-RAVIAW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 Fugue 52.8217% -64 - C4 -1S6D - 2SS8_HELAN A:[1-103] --------------------------------------PYGRGRTESGCYQQMEEAEMLNHCGMYLM--K--NL--GE---RSQVSPR--M-RE--E--D-H-----KQLCCMQLKNL----------D-----E-KCMCPAIMMMLNEPMW-I------------RM-----RD--------QVMSMA-HNLPIECNL-M-SQ-------PCQM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 SP3 50.0016% -39 - C4 -1XFL - TRXH1_ARATH A:[1-114] -------------------------------------------------------MASEEGQVIACH--T--VE--TW---NEQLQKA--N-ES--K--T-LVVVDFTASWCGPCRF-----------I-----A-PFFADLAKKL-----P-N------------VL-----FLK-------VDTDEL-KSVASDWAIQA-MP-------TFMFLKEGKILDKVVGAKKDELQSTIAKHLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 SP3 48.0816% -49 - C4 -1PS6 PDXA_ECOLI A:[1-328] VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQ--T--AG--TLTLLPVALRAP--V-TA--G--Q-L-----AVENGHYVVE-----------T-----L-ARACDGCLN------G-E------------FA-----AL--------ITGPVH-KGVINDAGI-P-FT-------GHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
15 SP3 46.7711% -76 - C4 -1F9M - TRXF_SPIOL A:[10-121] --------------------------------------------------------MEAIVGKVTEV--N--KD--TF------WPIV--KAAG--D--K-PVVLDMFTQWCGPCKA-----------M-----A-PKYEKLAEEY-----L-DVI----------FL-----KL--------DCNQEN-KTLAKELGI-RVVP-------TFKILKENSVVGEVTGAKYDKLLEAIQAARS--------------------------------------------------------------------------------------------------------------------------------------------------------------------


User Run . : Multi Template Modeling Result:

(4 SA) .........10........20........30........40........50........60.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC
39 96.87100%-121 - C- -M039 - A:[1-98] VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC
40 95.20100%-122 - C- -M040 - A:[1-98] VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC
42 93.84100%-110 - C- -M042 - A:[1-92] VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC
41 92.66100%-111 - C- -M041 - A:[1-92] VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC